Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq190 102 8e-17 >seq190 Length=1127857 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| |||||||||||||| || | |||||| ||| || ||||| || || || | Sbjct 281356 CTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAA 281297 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||| |||||||| || || || || |||||||| ||| || || ||||| | Sbjct 281296 AATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTT 281237 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 ||||| ||||| | |||||| || | || | ||||||||||||| ||| ||||| Sbjct 281236 TTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTAC 281177 Query 127102 AAAAATCTGCATGG 127115 || || ||||||| Sbjct 281176 GAATATTTGCATGG 281163 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 126922 CTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTA 126981 ||| ||||| |||||||| || | ||||| ||| || ||||| || || || | Sbjct 280717 CTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAA 280658 Query 126982 GATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTG 127041 |||| |||||||| || || || || |||||||| ||| || || ||||| | Sbjct 280657 AATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTT 280598 Query 127042 TTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101 ||||| ||||| | |||||| || | || | ||||||||||||| ||| ||||| Sbjct 280597 TTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTAC 280538 Query 127102 AAAAATCTGCATGG 127115 || || ||||||| Sbjct 280537 GAATATTTGCATGG 280524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497744907360