Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq232 145 1e-29 >seq232 Length=639093 Score = 145 bits (160), Expect = 1e-29 Identities = 331/490 (68%), Gaps = 6/490 (1%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || |||||||||| ||| || | |||||| | | | |||||| | |||||| Sbjct 595777 TCAACCGTGAACTTAATAGCATCAGTAGCAGGCTGAGTACGTAAATAGTAAACCCCGGTC 595718 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||||| ||| || || | ||||||| | ||||||| | | || | Sbjct 595717 TTGAGTCCCTTCTTCCATCCATAGAAGTGCATGCTCGTGAGTTTGCCGAAGGAAGGCTGC 595658 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAA-AGGCGCCCGATCTGCGGCCAT 204021 ||| | ||||| || || ||| || || || || | || | |||||||| ||||| Sbjct 595657 TCCAGATAGATGTTGAGCGATTGGGACTGATCAATAAATATGC-CACGATCTGCTGCCAT 595599 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTG 204081 || || || || ||||| || |||||||| |||||| ||| ||| || ||||||| Sbjct 595598 ATCAATGATAGTTTTCTGTTTTATTTCCCACACTGTCTTGTACAGGTCCTTGATGTGTTG 595539 Query 204082 AGGCACATCTTCCCACGT-CCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCT-CGTC 204139 ||| | | | || | || ||| | || ||||| | ||| ||||| || |||| | | Sbjct 595538 AGGAATACCCTCG-ATGTGCCTCAAGGAACCGTTATAGGCAATCAG-CTTTTCCTTCATA 595481 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | || |||| | || || | || ||||| | |||||||||||| | | Sbjct 595480 GCTTCGTCCCAGAGCCCTAAATCCACGAGGTCCCGTAGCAGGTGGGGGTTTACCACAAAG 595421 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || |||||| ||||| | ||| | | | |||| ||||| |||| ||||| | |||| Sbjct 595420 AACTCTCCGCTAAGCACACGGCGGTAGTAAATGTTGCTGGTGTATGGCTCGAAGGACTCG 595361 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||||| || | || || | || || || |||||||| ||||||| || ||||| Sbjct 595360 TTGTTTCCCAGGATTTGGGATGTCGATGCGGTCGGCATGGGGGCCAGGAACAACGAGTTA 595301 Query 204320 CGCACACCGT 204329 |||| ||||| Sbjct 595300 CGCAGACCGT 595291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795150091127840