Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq190 138 1e-27 >seq190 Length=1127857 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | ||| || || | ||| ||||||||||||||||||||||| | Sbjct 280754 TGCCTCCCCTGAGACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAG 280695 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| ||||||||||| | | Sbjct 280694 AAAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGG 280635 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | |||||| ||| ||||| ||||| | | | ||||| || | || | Sbjct 280634 GAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGA 280575 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| || ||||||||||| |||| || || || || |||||||| Sbjct 280574 CCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 280526 Score = 125 bits (138), Expect = 8e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | ||| | ||| || || | || ||||||||||| ||||||||||| | Sbjct 281393 TGCCACCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAG 281334 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||| || || |||| ||||||||||| | | Sbjct 281333 AAAGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGG 281274 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | |||||| ||| ||||| ||||| | | | ||||| || | || | Sbjct 281273 GAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGA 281214 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| || ||||||||||| |||| || || || || |||||||| Sbjct 281213 CCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 96.9 bits (106), Expect = 4e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || || | ||| | ||| || || | || |||||||||||||| |||||||| || Sbjct 626708 GCCCCCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGA 626649 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 ||||| || | || || ||||||||||| || || |||| ||||||||||| | || Sbjct 626648 AAGAGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGG 626589 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | | |||||| ||| ||||| ||||| | | | ||||| || | || || Sbjct 626588 AATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGAC 626529 Query 46546 ATCCACCGTGATGGTTTTGCC 46566 |||| || ||||| || || Sbjct 626528 CTCCAAGGTAATGGTCTTACC 626508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565234768343280