Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq190 131 2e-25 >seq190 Length=1127857 Score = 131 bits (144), Expect = 2e-25 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||||||||| || | || ||||||||||| || | || |||||| ||| Sbjct 280526 ATGCAAATATTCGTAAAGACTTTGACCGGCAAAACCATTACTTTGGAGGTCGAGCCCAGT 280585 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | || | || || | || || ||||| |||||| | ||||| Sbjct 280586 GACACTATCGAAAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCA 280644 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| |||||||| ||||| || || | |||||||| |||||||| Sbjct 280645 GCAGCGTCTGATTTTTGCGGGCAAGCAGCTTGAAGATGGCCGCACCCTTTCTGACTACAA 280704 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| ||| || || || | ||||| ||| | || || ||| Sbjct 280705 TATCCAAAAGGAGAGC-ACACTTCACCTAGTGCTTCGTCTCAGGGGAGGC 280753 Score = 125 bits (138), Expect = 7e-24 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||||||||||||||| || | || ||||||||||| || | || |||||| ||| Sbjct 281165 ATGCAAATATTCGTAAAGACTTTGACCGGCAAAACCATTACTTTGGAGGTCGAGCCCAGT 281224 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | || | || || | || || ||||| |||||| | ||||| Sbjct 281225 GACACTATCGAAAACG-TCAAGGCCAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCA 281283 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| |||||||| ||||| || || | |||||||| |||||||| Sbjct 281284 GCAGCGTCTGATTTTTGCGGGCAAGCAGCTTGAAGATGGTCGCACCCTTTCTGACTACAA 281343 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || |||||||| ||| || || || | ||||| ||| | || || ||| Sbjct 281344 TATTCAAAAGGAGAGC-ACTCTTCACCTAGTGCTTCGTCTCAGGGGTGGC 281392 Score = 95.1 bits (104), Expect = 1e-14 Identities = 146/203 (72%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 38271 GGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGT-GCAAACGCTTAAAGAAAA 38329 || || ||||| ||| | || |||||| ||| |||| | | ||||| | || | || Sbjct 626508 GGTAAGACCATTACCTTGGAGGTCGAGCCCAGTGACACTATCGAAAACG-TCAAGGCCAA 626566 Query 38330 AATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACA 38389 || | || || ||||| |||||| | ||||| ||||| || |||| |||||||| || Sbjct 626567 GATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTGATTTTTGCGGGCAAGCA 626626 Query 38390 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCATT 38448 ||| || || | || || || |||||||||||||||||||| ||| || || || Sbjct 626627 GCTTGAAGATGGCCGTACTCTTTCGGACTACAACATCCAAAAGGAGAGC-ACTCTTCACC 626685 Query 38449 TGGTGCTGCGTTTGAGAGGCGGC 38471 | ||||| ||| | || || ||| Sbjct 626686 TAGTGCTTCGTCTCAGGGGGGGC 626708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500169586389760