Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq277 295 8e-75 >seq277 Length=1084746 Score = 295 bits (326), Expect = 8e-75 Identities = 846/1280 (66%), Gaps = 42/1280 (3%) Strand=Plus/Plus Query 6887 TTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTT 6946 ||||| | || || || ||||| | | ||||| | ||||| | ||| || ||| Sbjct 22914 TTCTTGGTAGGGATGGTGGTATTACGCTTAATAAGCACAGTCATGACACCTCCGGCGGTT 22973 Query 6947 TCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG---TCTTGAACAGATTCG 7003 ||||| || || || || || | || || ||| |||||| ||||| | || Sbjct 22974 TCGAGACCGAGCGAAAGGGGAGCAACATC---GAGCAACAGGAGTTCTTGGA-----TCT 23025 Query 7004 TTCC---CT--TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCT 7058 | || || ||||| | | |||||| || ||||| | || ||||| ||||| || | Sbjct 23026 TACCAGACTGGTCACCGGAAAGGATGGCAGCCTGGACAGCGGCACCGTAGGCGACAGCTT 23085 Query 7059 CATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTT 7118 |||||||||| |||| | |||| || ||||| || | ||| | | |||| Sbjct 23086 CATCGGGGTTGATCGAGCGGCTGGGTTCCTTTCCGTTGAAGAAGTCCTTGATGAGCTGTT 23145 Query 7119 GAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTAT 7178 | || || ||||| || || || |||||||| | ||||| || | | |||| || | Sbjct 23146 GGATCTTGGGGATACGGGTGGAACCACCGACAAGAACGACCTCGTGGATTTTCCTCTTGT 23205 Query 7179 CGAT--CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 | | | || | ||| | | | ||||||||||| | | | | |||| || Sbjct 23206 CTAGGCCACTG-GACTCCA-GAGCCTTTTCGACAGGGATGAGAGTTCCCCTGAACTTCTC 23263 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 ||||| ||||| ||||| |||||| | |||| || | |||| | || ||| | Sbjct 23264 ACCACACATCTCCTCGAAACGAGCACGGCTGATGGTGGTGTTATAATCGATACCTTCGAA 23323 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCG---TCGAAGATAACGTTCGCTTTGCGCG 7353 | || || | || ||||| | ||| | | | || || || ||||| || || Sbjct 23324 GAGGGAGTCGAGCTCGATGGTGGCTTGGGTTGAGCTTGA-GAGTACA--CGCTTCGCACG 23380 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT-CTTTCTTAT 7412 ||||| || | | ||||| || |||||| ||| || ||| | ||||| | Sbjct 23381 TTCACAGTGGGTCCTCAGCCGACGGAGAGCACGCTTGTTGGTGGCAATGTTCTTTCCATT 23440 Query 7413 GTTTACGTTTA--AACTCTTCAGAGA-AGTG-TCGA--AGGAGTCTCGAATCGAAATCTT 7466 ||| | | | || || | || | |||| || | ||||| | ||||| || | Sbjct 23441 GTTCATCCTCATGAAGTCA-CGGACACAGTGCTCAACGAGGAGGTTG---TCGAAGTCCT 23496 Query 7467 CACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGT 7526 ||||||| | ||| ||||| || ||||| || |||||||| |||||||| |||| ||| Sbjct 23497 CACCACCGAGGTGGGTATCACCAGCGGTTGCCTTGACTTCGAAGATACCGTCTTCGATGG 23556 Query 7527 TTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGT 7586 | | | || ||||| || |||||||| || || || || || || |||||| | ||| Sbjct 23557 TAAGGATGGATACATCGAAAGTACCACCTCCGAGATCGAAGATAAGGACGTTCTTCTCGG 23616 Query 7587 CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATAC 7646 | ||||| ||||||||||| || ||||| || || || ||||||||||| |||| Sbjct 23617 TAGATCCCTTCTTGTCGAGACCGTAGGCAATAGCGGCGGCGGTGGGTTCATTAATGATAC 23676 Query 7647 G-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCG 7705 | | ||| ||| || |||||||| || | ||||| || || || || || || || || Sbjct 23677 GCATGAC-GTTGAGTCCAGCAATGGTACCGGCATCCTTGGTGGCCTGACGCTGAGAGTCA 23735 Query 7706 TTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCC 7765 || || ||||| ||||| || | ||| || ||| |||| |||| || || || ||| Sbjct 23736 TTGAAATAGGCGGGGACGGTAATGACGGCATCCTTGACGGTCTTGCCAAGGTAGAGTTCA 23795 Query 7766 GCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTC 7825 || || || ||||| ||| |||| ||||| |||||||| || || | || ||| Sbjct 23796 GCAATTTCCTTCATCTTGATAAGGACCATGGATGAAATTTCCTCGGGGTGGAAGGTCTTC 23855 Query 7826 GTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTA 7885 | | || | || ||||| || |||| || | || ||||| ||| ||||| Sbjct 23856 TTCTGTCCCTGGAAGGTTACTTCGATGGTGGGCTTGCCGCCAACACCGTTGATGACCTTG 23915 Query 7886 TACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGA 7945 | | ||| | ||||| || || ||||| |||| ||| | || |||||||| Sbjct 23916 AATGGCCAGTGCTTCATGTCATCCTGGACGGTGGGGTCGTCGAACCTCCTCCCGATAAGC 23975 Query 7946 CGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCC 8005 | ||| || || || || ||||| | ||||| ||| |||||||| || ||||| Sbjct 23976 CTCTTGGCGTCGAAGACAGTGTTCTCTGGGTTACGGGCCTCCTGGTTCTTAGCGGCGTCA 24035 Query 8006 CCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 || || ||||| || | | || || || |||||||| || ||||| || | || || Sbjct 24036 CCAATGAGACGCTC---AGTGTCAGTGAAGGCGACGTAGGAAGGGGTGGTCCTGTTACCC 24092 Query 8066 TGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTT 8125 || ||||| | ||||||||||| || || | | || || || || || || || Sbjct 24093 TGATCGTTAGGGATAATTTCTACATTGTTGTCCTTGTATACACCCACACAGGAGTAGGTG 24152 Query 8126 GTTCCTAAATCAATACCGAT 8145 || || || || ||||| || Sbjct 24153 GTACCCAAGTCGATACCAAT 24172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635128719271760