Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq232 163 4e-35 >seq232 Length=639093 Score = 163 bits (180), Expect = 4e-35 Identities = 845/1332 (63%), Gaps = 52/1332 (4%) Strand=Plus/Plus Query 111922 ATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTG 111981 |||||||| | |||||| | || |||| || || || || | |||||| |||| | || Sbjct 594322 ATGGTATTGTGCCAATGTTGCGTATATTCAATGCAACTGCAAGGTATGTAGACCAGGGTG 594381 Query 111982 GGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGG 112038 | | |||||||| || | || | || | || ||||||||||| |||||||||| Sbjct 594382 GTGGCAAGCGCAAGGGGTCATTTGCCATATACATGGAACCATGGCACGCTGATATCATGG 594441 Query 112039 AGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTC 112097 | ||||| || ||||| || || || ||||| || |||| || || || ||| Sbjct 594442 ATTTCCTGGACTTGCGGAAAAATCATGGATCCGAGGA-AAGCCGTGCACGTGACCTATTC 594500 Query 112098 TCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCT 112157 | || || |||||||| ||||| || |||||| | || || | | |||| | ||| | Sbjct 594501 TATGCACTGTGGATTCCGGATCTGTTTATGAAGCGTGTCGAAGCAAATGGCGACTGGACC 594560 Query 112158 CTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCC 112217 || | || || || || | ||| || | |||| |||||| ||||| ||||| Sbjct 594561 CTAATGTGCCCTGATGAGTGCCGCGGACTGTATGATGTTTGGGGTGATGAGTTCGAAGCG 594620 Query 112218 CTCTACACAAAGTACGAGGAAGAAAGTCGGGC---GACTGC--GACGGTGCCAGCTGCCG 112272 | || || || || || ||| | ||| | | || || | || || || Sbjct 594621 TTATATACCAAATATGAACAAG-----CCGGCTTAGGCCGCAAAACTATTCCTGC--CCA 594673 Query 112273 A--TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTA 112330 | | ||| ||||||||| | ||||| ||| || |||| || | ||||||||| Sbjct 594674 AACACTTTGGTTTGCTATTCTCCAAAGTCAAATCGAAACCGGTAACCCTTTTATGCTTTA 594733 Query 112331 CAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAA 112390 ||| || || || || |||| ||| ||| |||| |||| |||||| || || Sbjct 594734 CAAGGATGCATGCAATGCAAAGTCTAACCAACAGAACCTGGGAACCATCAAGTCATCTAA 594793 Query 112391 CCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGC 112450 ||| || || ||| | | | ||| | ||| ||| ||| ||||| ||||| || Sbjct 594794 CCTGTGCTGTGAGATCGTACAGTACACATCCCCAGAAGAGGTGGCAGTGTGCAACCTGGC 594853 Query 112451 ATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACT 112510 || || || || || | ||||||| | || || || | || | |||| | Sbjct 594854 TTCCATTGCGCTGCCGATGTATGTGAACAAGGAAACCCGCACGTACGACTTCCAAAAGTT 594913 Query 112511 CCACGAAGTTACGAAAACTGTC---ACAAAAAACCTAAACAGAGTTATTGATAGAAATTT 112567 ||||||| | |||| ||| | ||||| |||| | | ||||| ||||| | Sbjct 594914 GTACGAAGTCTC---CCGTGTCATTACATACAACCTCAACAAAATCATTGACAGAAACTA 594970 Query 112568 TTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGG 112624 || || || ||| | | || || ||| | ||| | || |||||| | || Sbjct 594971 CTATCCTGTGCCGGAGGC-GAAGGT--GTCCAATCATCGCCACAGACCTATTGGTGTAGG 595027 Query 112625 TGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGC 112684 || || ||| | ||||| || || || ||| || | || || || || ||||| Sbjct 595028 AGTGCAGGGTTTGGCGGACACCTTTATGCTGATGCGCTACCCGTTCGAATCTGAGGAAGC 595087 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCT---TGAGGCGAG 112741 |||||| | || |||||||| ||||| || || ||| ||| |||| | | Sbjct 595088 CAAGGAACTTAACCGCCGTATATTCGAGACGATTTACTACGGTTGTCTGGATGAGTCTAT 595147 Query 112742 TTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 112801 ||| |||||| || ||||||| | ||||| | | ||| || ||||| ||| | Sbjct 595148 TTC---GTTGGCCGAACGTGATGGTACGTATGAGTCGTACCCGGGATCGCCAGCCTCAAA 595204 Query 112802 AGGGGTGCTTCAATTTGATATGTGGG-----AAGGT-GAGACCAAGCTTCACTACGACTG 112855 ||| ||| || || || | |||| | || || | |||| | | ||||| Sbjct 595205 AGGCAAGCTGCAGTTCGACCTTTGGGGCGCCACTGTGGACAACAAGTT---ATGGGACTG 595261 Query 112856 GGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACC 112915 ||||| ||| ||| ||||| || | ||||| |||||| | || |||| || Sbjct 595262 GGACGATCTTAAGCGCCGCATGGCCAAGCACGGTCTGCGTAACTCGTTGTTCCTGGCCCC 595321 Query 112916 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 112975 ||||| || || || || | |||||| |||| || || || | ||| || || ||||| Sbjct 595322 CATGCCGACCGCATCGACATCCCAAATCCTGGGAAACAACGAGTCCTTCGAGCCATACAC 595381 Query 112976 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCT 113035 | ||||| || | | || |||||||| | | || ||| || || Sbjct 595382 CAGCAACATTTACTACCGCCGTGTGCTTAGCGGAGAGTTCTTTGTGGTAAACCCCCACCT 595441 Query 113036 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAA 113095 | |||||| || | || |||||| | | | ||||||||| | | ||| Sbjct 595442 GCTACGGGACCTCGTGGATTTAGGGCTCTGGGACGAAGCTATGAAGGA---AAAGCTGAT 595498 Query 113096 AGCGGGT---GGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTA 113152 || | |||||| | | || | || |||||| | | || ||| | |||| Sbjct 595499 TGCCTATAACGGTTCCTTGAGGCACATCGAGGGTATTCCTCAACACATCAAGGACCTGTA 595558 Query 113153 CCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCG 113212 | ||||| |||||||| || ||| | ||||||| ||||| ||||||||||| Sbjct 595559 CAAGACAGTGTGGGAAATAAAACAGAAAACTATCATTGATATGGCAGCAGATCGTGGCAT 595618 Query 113213 CTTCATTGATCA 113224 || |||||||| Sbjct 595619 ATTTATTGATCA 595630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620738411730080