Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq232 131 2e-25 >seq232 Length=639093 Score = 131 bits (144), Expect = 2e-25 Identities = 804/1275 (63%), Gaps = 44/1275 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||| | || || || |||| |||||| | || || Sbjct 595393 TAAATGTTGCTGGTGTATGGCTCGAAGGACTCGTTGTTTCCCAGGATTTGGGATGTCGAT 595334 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTG---ATGCGT 106051 || || ||||| || |||| || | |||||| ||||| | |||| ||||| Sbjct 595333 GCGGTCGGCATGGGGGCCAGGAACAACGAGTTACGCAGACCGTG---CTTGGCCATGCGG 595277 Query 106052 TCCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTC-ACCTT-----CCCACATATCA 106105 ||| ||| | |||||||| | | |||| | || || | |||| | || Sbjct 595276 CGCTTAAGATCGTCCCAGTCCCAT---AACTTGTTGTCCACAGTGGCGCCCCAAAGGTCG 595220 Query 106106 AATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCT 106165 || || ||| |||| || | || || ||| | | |||||| | ||| | | Sbjct 595219 AACTGCAGCTTGCCTTTTGAGGCTGGCGATCCCGGGTACGACTCATACGTACCATCACGT 595160 Query 106166 TCAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCA 106225 || ||||| | | | ||||| | ||| || || || || || ||||| Sbjct 595159 TCGGCCAACGAAATAGACTCATCCAGACAACCGTAGTAAATCGTCTCGAATATACGGCGG 595100 Query 106226 TTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCG 106285 || | ||||||||||| || || || || | |||||| || ||||| ||||| Sbjct 595099 TTAAGTTCCTTGGCTTCCTCAGATTCGAACGGGTAGCGCATCAGCATAAAGGTGTCCGCC 595040 Query 106286 AGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCG-CAGTC 106342 | ||| || || || | ||||||||||||||| || ||| ||| ||||| | | | Sbjct 595039 AAACCCTGCACTCCTACACCAATAGGTCTGTGGCGATGATTGGACACCTTCGCCTCCGGC 594980 Query 106343 TCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTG 106402 || ||||| | ||||||||||||| | ||| || || | |||| | | | Sbjct 594979 ACA---GGATAGTAGTTTCTGTCAATGATTTTGTTGAGGTTGTATGTAATGACACGGGAG 594923 Query 106403 ATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGG 106462 | ||| | | |||| | || | ||||| || || | || |||||| | || || Sbjct 594922 ACTTCGTACAACTTTTGGAAGTCGTACGTGCGGGTTTCCTTGTTCACATACATCGGCAGC 594863 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 || || || |||| ||||| || ||| ||| || |||||||| || || || Sbjct 594862 GCAATGGAAGCCAGGTTGCACACTGCCACCTCTTCTGGGGATGTGTACTGTACGATCTCA 594803 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 |||| ||| || ||| || || |||| |||| ||||||| |||| ||||| Sbjct 594802 CAGCACAGGTTAGATGACTTGATGGTTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCAT 594743 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTT--GAGAATTGCCT 106640 ||||||||||| ||||| | || | || || || | |||||| |||||| || Sbjct 594742 GCATCCTTGTAAAGCATAAAAGGGTTACCGGTTTC--GATTTGACTTTGGAGAATAGCAA 594685 Query 106641 TCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCC--CTCCGCC----TCGTACT 106694 ||| | ||| || ||| | ||| || || ||| | || || | Sbjct 594684 ACCAAAGTGTTTGGGCAGG---AATAGTTTTG---CGGCCTAAGCCGGCTTGTTCATATT 594631 Query 106695 TTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTG 106754 | || || | ||||| ||||| |||||| | || | || || | || || | Sbjct 594630 TGGTATATAACGCTTCGAACTCATCACCCCAAACATCATACAGTCCGCGGCACTCATCAG 594571 Query 106755 GACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCC 106814 | || | || | ||| | ||| | || || |||||||| || || || ||||||| Sbjct 594570 GGCACATTAGGGTCCAGTCGCCATTTGCTTCGACACGCTTCATAAACAGATCCGGAATCC 594511 Query 106815 ACAGGGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAAC 106873 |||| | | || || || | | || || || ||| || || || || || Sbjct 594510 ACAGTGCATAGAATAGGTCACGTGCA-CGGCTTTCCTCGGATCCATGATTTTTCCGCAAG 594452 Query 106874 TCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTT 106933 || ||||| ||||||||||| ||||||||||| || | || | || | || ||||| Sbjct 594451 TCCAGGAAATCCATGATATCAGCGTGCCATGGTTCCATGTATATGGCAAATGACCCCTTG 594392 Query 106934 CG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGA 106990 || | ||| | || | |||||| | || || || || |||| || | |||||| Sbjct 594391 CGCTTGCCACCACCCTGGTCTACATACCTTGCAGTTGCATTGAATATACGCAACATTGGC 594332 Query 106991 ATAATACCATCTGAT-TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATC 107049 | |||||||| || | | ||||| || || || || | | |||| || | | Sbjct 594331 ACAATACCAT-TGCTCTTCCCATTGGTGCCACGGATGTACGCCCCACTGGCCCTTATTTT 594273 Query 107050 ATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGT 107109 || | | || ||||| ||||| ||||| ||| || |||| ||| | || Sbjct 594272 GTGACAGGCAAGGCCTATACCGCCAGCACACTTGCTGATGAATGCGCACTGCGTCAATGT 594213 Query 107110 TCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTG 107169 || ||||||| | |||||| || || | | | | ||| ||||| ||||| || Sbjct 594212 CTCAAAGATACCAGCTAATGAGTCATCTTTCATATCCAACAAGAAACAACTCGACATTTG 594153 Query 107170 CGGTCTTGGTGTACC 107184 || ||| | ||||| Sbjct 594152 TGGCCTTTGGGTACC 594138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977009373360