Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq190 140 7e-28 >seq190 Length=1127857 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||| ||| |||||||||||||| || | ||| || | |||||||| Sbjct 281373 ACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCA 281314 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || || || || |||||||| ||||| || || || || ||| Sbjct 281313 AGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 281254 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||||||||| || || ||||| ||| || || || | |||| || Sbjct 281253 ATCTTGGCCTTGACGTTTTCGATAGTGTC---ACTGGGCTCGACCTCCAAAGTAATGGTT 281197 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || |||||||| |||||||| | |||||| Sbjct 281196 TTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 116 bits (128), Expect = 8e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||||||| ||| ||||| || ||||| || | |||||| | |||||||| Sbjct 626689 ACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCATCTTCA 626630 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || || || || || || |||||||| ||||| || || || || ||| Sbjct 626629 AGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 626570 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||||||||| || || ||||| Sbjct 626569 ATCTTGGCCTTGACGTTTTCGATAGTGTC 626541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109474293370238