Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq277 122 7e-22 >seq277 Length=1084746 Score = 122 bits (134), Expect = 7e-22 Identities = 361/551 (66%), Gaps = 7/551 (1%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| || || || ||||| || ||||| ||||| | | | || Sbjct 24176 AGTTATTGGTATCGACTTGGGTACCACCTACTCCTGTGTGGGTGTATACAAGGACAACAA 24117 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 || |||||||| | || ||||| |||||||| || || || || || || | ||||| Sbjct 24116 TGTAGAAATTATCCCTAACGATCAGGGTAACAGGACCACCCCTTCCTACGTCGCCTTCAC 24057 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | | | ||||||| || || || | || | | |||| || || Sbjct 24056 TGACACTGAGCGTCTCATTGGTGACGCCGCTAAGAACCAGGAGGCCCGTAACCCAGAGAA 23997 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | || || || || | | || || || || || | || | || || |||| Sbjct 23996 CACTGTCTTCGACGCCAAGAGGCTTATCGGGAGGAGGTTCGACGACCCCACCGTCCAGGA 23937 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAA---TGTTTCTGGAAAACCTTATATTGA 550287 || |||||||| ||||| ||| | | | || |||| || || || || || Sbjct 23936 TGACATGAAGCACTGGCCATTCAAGGTCATCAACGGTGTTGGCGGCAAGCCCACCATCGA 23877 Query 550288 AGCTACTCATGAAGGATCTGTTAAACAATTTTCACCA-GAACAAATTTCATCTATGGTTT 550346 || || | | ||| | | || | || |||| || |||||||||| ||||| Sbjct 23876 AGTAAC-CTTCCAGGGACAGAAGAAGACCTTCCACCCCGAGGAAATTTCATCCATGGTCC 23818 Query 550347 TAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTA 550405 | || || ||||| ||| || | || | | | ||||| || | |||||| || Sbjct 23817 TTATCAAGATGAAGGAAATTGCT-GAACTCTACCTTGGCAAGACCGTCAAGGATGCCGTC 23759 Query 550406 ATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGT 550465 || || || || || ||||| |||||||| || ||||| || || || ||||| || Sbjct 23758 ATTACCGTCCCCGCCTATTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCCGGTACC 23699 Query 550466 ATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATAT 550525 ||||||||||| || || | ||||| || |||||||| || || || || |||| || Sbjct 23698 ATTGCTGGACTCAACGTCATGCGTATCATTAATGAACCCACCGCCGCCGCTATTGCCTAC 23639 Query 550526 GGACTTGATAA 550536 || || || || Sbjct 23638 GGTCTCGACAA 23628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029268817361860