Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq232 107 4e-18 >seq232 Length=639093 Score = 107 bits (118), Expect = 4e-18 Identities = 468/733 (64%), Gaps = 22/733 (3%) Strand=Plus/Minus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATG 213539 ||||| || ||| ||||||||||| || |||||||| | | | |||||||| | | Sbjct 594868 GGCAGCGCAATGGAAGCCAGGTTGCACACTGCCACCTCTTCTGGGGATGTGTACTGTACG 594809 Query 213540 ATCTCGGTGCACAGGTT-GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGC 213598 ||||| ||||||||| | || | | ||||| ||||||||||| ||||| |||||||| Sbjct 594808 ATCTCACAGCACAGGTTAGATGACTTG-ATGGTTCCCAGGTTCTGTTGGTTAGACTTTGC 594750 Query 213599 GTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTAT 213658 ||| | ||||||||| ||||| | ||| ||||| || | || || || Sbjct 594749 ATTGCATGCATCCTTGTAAAGCATAAAAGGGTTACCGGTTTCGATTTGACTTTGGAGAAT 594690 Query 213659 CTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC---CTC 213715 ||| | || ||| | || | | | | ||| | ||| || Sbjct 594689 AGCAAACCA-AAGTGTTTGGGCAGGAATA---GTTT------TGCGGCCTAAGCCGGCTT 594640 Query 213716 GTAC-TGTTCG---TAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGAC 213771 || | | || | || | | | | ||| || | ||||| || | |||||| | | Sbjct 594639 GTTCATATTTGGTATATAACGCTTCGAACTCATCACCCCAAACATCATACAGTCCGCGGC 594580 Query 213772 AGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGT 213831 | | || ||||| ||| ||||||| || | || ||| | || ||| ||||| | Sbjct 594579 ACTCATCAGGGCACATTAGGGTCCAGTCGCCATTTGCTTCGACACGCTTCATAAACAGAT 594520 Query 213832 CCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTT 213891 |||| | |||||| || ||| ||||| | | | || || || |||| |||| Sbjct 594519 CCGGAATCCACAGTGCATAGAATAGGTCACGTGCACGGCTTTCCTCGGATCCATGATTTT 594460 Query 213892 TGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGG 213951 | |||| || || || || | ||| || |||||||| || |||||||| |||||||| | Sbjct 594459 TCCGCAAGTCCAGGAAATCCATGATATCAGCGTGCCATGGTTCCATGTATATGGCAAATG 594400 Query 213952 CGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCA 214008 ||| | |||| || |||||||| || ||| || ||||| || |||| Sbjct 594399 ACCCCTTGCGCTTGCCACCACCCTGGTCTACATACCTTGCAGTTGCATTGAATATACGCA 594340 Query 214009 GGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCC 214068 | || || | || ||| || || ||||| || || |||| || ||||| Sbjct 594339 ACATTGGCACAATACCATTGCTCTTCCCATTGGTGCCACGGATGTACGCCCCACTGGCCC 594280 Query 214069 TCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCC 214128 | | ||| || || ||||| || || || ||||| ||| | ||||| || Sbjct 594279 TTATTTTGTGACAGGCAAGGCCTATACCGCCAGCACACTTGCTGATGAATGCGCACTGCG 594220 Query 214129 TCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCG 214188 ||| ||||| | ||| || || | ||||||| | | | || |||||| || |||| Sbjct 594219 TCAATGTCTCAAAGATACCAGCTAATGAGTCATCTTTCATATCCAACAAGAAACAACTCG 594160 Query 214189 AGAGCTGGGGCCT 214201 | | || ||||| Sbjct 594159 ACATTTGTGGCCT 594147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526814901760