Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq277 158 8e-33 >seq277 Length=1084746 Score = 158 bits (174), Expect = 8e-33 Identities = 373/552 (68%), Gaps = 11/552 (2%) Strand=Plus/Minus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 |||||||| || || || || || ||| ||||| | ||| | | | || ||| Sbjct 24172 ATTGGTATCGACTTGGGTACCACCTACTCCTGTGTGGGTGTATACAAGGACAACAATGTA 24113 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 ||||| || | || || || ||||| || || || || || || || | || ||||| Sbjct 24112 GAAATTATCCCTAACGATCAGGGTAACAGGACCACCCCTTCCTACGTCGCCTTCACTGAC 24053 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 ||||| | ||| ||||| || || ||||| | || | || ||| || | || ||| Sbjct 24052 ACTGAGCGTCTCATTGGTGACGCCGCTAAGAACCAGGAGGCCCGTAACCCAGAGAACACT 23993 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 | || || || || || | || || | | || || || |||| ||||| ||| Sbjct 23992 GTCTTCGACGCCAAGAGGCTTATCGGGAGGAGGTTCGACGACCCCACCGTCCAGGATGAC 23933 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAA---TGTTGGTGGTAAACCATATATAGAAGCA 474628 ||| || ||||| || ||||| || || |||||| || || || || |||| | Sbjct 23932 ATGAAGCACTGGCCATTCAAGGTCATCAACGGTGTTGGCGGCAAGCCCACCATCGAAGTA 23873 Query 474629 ATACACGCAGGTGAAACTA-AACAATTTTCACCG-GAACAAATTTCTTCAATGGTTTTAG 474686 | | |||| || | | || | || |||| || ||||||| || ||||| | Sbjct 23872 ACCTTC-CAGG-GACAGAAGAAGACCTTCCACCCCGAGGAAATTTCATCCATGGTCCTTA 23815 Query 474687 CCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAA-GTAACTGATGCAGTAAT 474744 ||| ||||| ||| || || ||| || ||||| ||||| || | ||||| || || Sbjct 23814 TCAAGATGAAGGAAATTGCTGAACTC-TACCTTGG-CAAGACCGTCAAGGATGCCGTCAT 23757 Query 474745 TACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 ||| || || || ||||| ||||| ||||| ||||| || || || ||||| || | || Sbjct 23756 TACCGTCCCCGCCTATTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCCGGTACCAT 23697 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| || || || || | ||||| ||||||||||| || || ||||| |||| || || Sbjct 23696 TGCTGGACTCAACGTCATGCGTATCATTAATGAACCCACCGCCGCCGCTATTGCCTACGG 23637 Query 474865 TCTTGATAAGAA 474876 ||| || ||||| Sbjct 23636 TCTCGACAAGAA 23625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268157152046072