Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq232 214 2e-50 >seq232 Length=639093 Score = 214 bits (236), Expect = 2e-50 Identities = 1039/1635 (64%), Gaps = 36/1635 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| ||| ||||||| ||| | || || ||||| ||| | | |||||| || | Sbjct 594011 CCCGCAGCACATGTTAATGAGAGTTGCGGCAGGCATTCACTGTGGAGACATCGAGCGTAC 594070 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||||| || |||| || | |||| |||| || || || || || | | Sbjct 594071 GATTCAGACATATCACCTGATGAGTCAGAAGTAT-TTCACCCATGCTACGCCGACGTTGT 594129 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 | | ||||| | ||| || || ||||| ||||| ||| | | | | || || | Sbjct 594130 TTTTCTCCGGTACCCAAAGGCCACAAATGTCGAGTTGTTTCTTGTTGGATATGAAAGATG 594189 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 ||||| | ||||||| || || | ||| |||| || ||| ||||| |||| Sbjct 594190 ACTCATTAGCTGGTATCTTTGAGACATTGACGCAGTGCGCATTCATCAGCAAGTGTGCTG 594249 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | ||||| || | | || | | || |||| | | || || || || | Sbjct 594250 GCGGTATAGGCCTTGCCTGTCACAAAATAAGGGCCAGTGGGGCGTACATCCGTGGCACCA 594309 Query 75510 ATGGTCA-ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||| | | || |||||||| | |||||| | || |||| || || || || | ||| Sbjct 594310 ATGGGAAGAGCA-ATGGTATTGTGCCAATGTTGCGTATATTCAATGCAACTGCAAGGTAT 594368 Query 75569 GTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 ||| | || | || | ||||||||||| | || | ||| ||||||||||||| Sbjct 594369 GTAGACCAGGGTGGTGGCAAGCGCAAGGGGTCATTTGCCATATACATGGAACCATGGCAC 594428 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 || ||||||||||| ||||| || || || || || || ||| || || || Sbjct 594429 GCTGATATCATGGATTTCCTGGACTTGCGGAAAAATCATGGATCCGAGGAAAGCCG-TGC 594487 Query 75686 A-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | | || || || | | ||||||||||| || || || |||||||| || || | Sbjct 594488 ACGTGACCTATTCTATGCACTGTGGATTCCGGATCTGTTTATGAAGCGTGTCGAAGCAAA 594547 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 ||| | ||| | || | || || || || | || || | || | |||||| Sbjct 594548 TGGCGACTGGACCCTAATGTGCCCTGATGAGTGCCGCGGACTGTATGATGTTTGGGGTGA 594607 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGG--TAGAGC-CAATGCGACTGT 75861 ||||| ||||| | || || || |||||| | | || ||| | ||| ||| | Sbjct 594608 TGAGTTCGAAGCGTTATATACCAAATATGAACAAGCCGGCTTAGGCCGCAAA---ACTAT 594664 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 || ||| ||||| ||||||||| || || | || || || | || | Sbjct 594665 TCCTGCCCAAACACTTTGGTTTGCTATTCTCCAAAGTCAAATCGAAACCGGTAACCCTTT 594724 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||||||||||||||||| || || ||| ||||||| |||| ||||||| ||||| Sbjct 594725 TATGCTTTACAAGGATGCATGCAATGCAAAGTCTAACCAACAGAACCTGGGAACCATCAA 594784 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || || || ||| || || || |||||||| || ||| ||| || || Sbjct 594785 GTCATCTAACCTGTGCTGTGAGATCGTACAGTACACATCCCCAGAAGAGGTGGCAGTGTG 594844 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTA 76101 ||| |||| || || || || || | |||||| || | || || ||||| | || | Sbjct 594845 CAACCTGGCTTCCATTGCGCTGCCGATGTATGTGAACAAGGAAACCCGCACGTACGACTT 594904 Query 76102 TGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAG 76161 |||| | | ||| || | | |||| | || || ||| | |||||||||| Sbjct 594905 CCAAAAGTTGTACGAAGTCTCCCGTGTCATTACATACAACCTCAACAAAATCATTGACAG 594964 Query 76162 AAATTTTTATCCCGTTGAGACTG-CGCGAA--AGTCTAATATGCGACACAGACCTATTGG 76218 ||| | ||||| || | | | ||||| ||| ||| || |||||||||||||| Sbjct 594965 AAACTACTATCC---TGTGCCGGAGGCGAAGGTGTCCAATCATCGCCACAGACCTATTGG 595021 Query 76219 TTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGA 76278 | | || || || ||| | ||||| ||||| || |||||| | || || || || Sbjct 595022 TGTAGGAGTGCAGGGTTTGGCGGACACCTTTATGCTGATGCGCTACCCGTTCGAATCTGA 595081 Query 76279 TGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGC 76338 ||||||||||| | || ||||| || || || || || ||| | ||||| | Sbjct 595082 GGAAGCCAAGGAACTTAACCGCCGTATATTCGAGACGATTTACTACGGTTGTCTGGATGA 595141 Query 76339 GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC 76398 | | | ||||| ||| | ||| | |||||| | | ||| || || || || Sbjct 595142 GTCTATTTCGTTGGCCGAACGTGATGGTACGTATGAGTCGTACCCGGGATCGCCAGCCTC 595201 Query 76399 CCAAGGGGTGCTTCAGTTTGATATGTGGG-----AAGGT-GAAACCAAGCTCAACTACGA 76452 |||| ||| ||||| || | |||| | || || | |||| | | || Sbjct 595202 AAAAGGCAAGCTGCAGTTCGACCTTTGGGGCGCCACTGTGGACAACAAGTT---ATGGGA 595258 Query 76453 CTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGC 76512 |||||| | ||| ||| ||||| || | ||||| |||||| | || |||| Sbjct 595259 CTGGGACGATCTTAAGCGCCGCATGGCCAAGCACGGTCTGCGTAACTCGTTGTTCCTGGC 595318 Query 76513 ACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATA 76572 || ||||| || || || || | |||||| |||| || || || | ||| || ||||| Sbjct 595319 CCCCATGCCGACCGCATCGACATCCCAAATCCTGGGAAACAACGAGTCCTTCGAGCCATA 595378 Query 76573 CACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCA 76632 ||| | ||||| ||| | | || || ||||| | | || ||| || Sbjct 595379 CACCAGCAACATTTACTACCGCCGTGTGCTTAGCGGAGAGTTCTTTGTGGTAAACCCCCA 595438 Query 76633 CCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGT 76692 ||| | |||||| | | | || |||||| | | | ||||||||| | | | Sbjct 595439 CCTGCTACGGGACCTCGTGGATTTAGGGCTCTGGGACGAAGCTATGAAGGA---AAAGCT 595495 Query 76693 GAAAGCGGGT---GGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCT 76749 || || | |||||| | | ||| | ||| || | | |||||| | || Sbjct 595496 GATTGCCTATAACGGTTCCTTGAGGCACATCGAGGGTATTCCTCAACACATCAAGGACCT 595555 Query 76750 CTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGG 76809 ||| |||||||||||||| || |||| | ||||||| ||||| ||||||||||| Sbjct 595556 GTACAAGACAGTGTGGGAAATAAAACAGAAAACTATCATTGATATGGCAGCAGATCGTGG 595615 Query 76810 TCGCTTCATTGATCA 76824 || |||||||| Sbjct 595616 CATATTTATTGATCA 595630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596565767040320