Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 102 1e-15 >seq1 Length=1420996 Score = 102 bits (112), Expect = 1e-15 Identities = 168/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 || ||||||| ||||||||||||||||| ||||| |||||| | | ||| || ||| | | Sbjct 478866 TGAACTTGGTCACGGCCTTGGTACCCTCAGAGACAGCGTGCTTCGACAGCTCACCGGGAA 478807 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | || || ||||| | |||||||| || || || | |||||| || | Sbjct 478806 GAACAAGCCTGACAGCAGTCTGAACCTCGCGGGAGCTGAGGGTTTCCTTCTTGTT-GTAC 478748 Query 1485590 GCGCCAGGC-GGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || | || || ||||||| | | || ||||| ||||| | | || |||||| Sbjct 478747 TTGCAAAGCTTGCTGGCCTCGCCGGCAATCTTGTCGAAGGTGTCGGTAATGAAGGAGTTC 478688 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 |||||| ||| || || ||| || || ||| ||||| || ||||| | ||||||| Sbjct 478687 ATGATCATCATGGACTTCTTGCTAATACCGGTGTCAGGGTGGACTTGCTTCAACACCTTG 478628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916191723475646