Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1 105 8e-18 >seq1 Length=1420996 Score = 105 bits (116), Expect = 8e-18 Identities = 191/277 (69%), Gaps = 2/277 (1%) Strand=Plus/Minus Query 146871 AATCTTGAGCTTGGGGAA-GGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCA 146929 || |||||||| ||||| |||| ||| ||| | | | ||| | |||| | |||| Sbjct 251303 AAGCTTGAGCTGAGGGAAAGGGTAGGGAATTCGCGAC-ATCTGGAGCTTCATAGCGTCCA 251245 Query 146930 CGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGC 146989 | |||| || ||| |||||||| ||| | || |||| ||||| |||||| || | || Sbjct 251244 CATGGTCGACGTATACGTGCGCATCCGCGAGATTGTGTACAAATTCCCCCAATTTCAAGC 251185 Query 146990 CGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCC 147049 | || || || | |||| ||||| | | || ||||||||||| || || | Sbjct 251184 CACATACTTGTGCGATCATGGCCGTGAGGATGGCATAAGAAGCTATGTTGAATGGCACAC 251125 Query 147050 CCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGT 147109 | || |||| ||| | || | |||| || | ||| || |||| |||||| ||| | Sbjct 251124 CAAGACCCAAGTCACATGAGCGTTGGTGCAACATGCAGGACAGCTTCCCGTCCCTCACAT 251065 Query 147110 AAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 | |||||| | ||| |||||| || || |||||||| Sbjct 251064 AGAACTGGTAGAGGCAGTGGCATGGTGGAAGCGCCAT 251028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484251089600