Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq356 87.8 3e-11 >seq356 Length=876930 Score = 87.8 bits (96), Expect = 3e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | |||||||| ||||| || | || | ||||| || || Sbjct 221481 ATCTACAAGGTGTTGAAGCAGGTACACCCTGAGACTGGTGTG------TCCAAGAAATCT 221534 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||||| |||||||| || || |||||||||| ||||||| || | |||||| Sbjct 221535 ATGTCCATCATGAATTCATTCATCAACGACATTTTCGACCGTATGGCTTTGGAGGCCACG 221594 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 | || | | ||||||| ||||| | || | ||||| || || || || ||| Sbjct 221595 AGGCTCATTAGATACAACAAGAAGAACACATTGAGCTCTCGCGAAATTCAAACTGCAGTG 221654 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || | | | || ||||| ||| ||||||||| || |||||||| Sbjct 221655 CGTCTTTTACTACCTGGTGAACTCTCCAAGCACGCCGTATCTGAGGGCAC 221704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177761623755268