Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq190 134 1e-26 >seq190 Length=1127857 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || ||| ||||||||||| |||||||| | Sbjct 281391 CCACCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAA 281332 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || || || ||||| ||||| |||||||||| ||||||||| || || || Sbjct 281331 AGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGA 281272 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| || | ||||| | || || Sbjct 281271 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACC 281212 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct 281211 TCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| ||||| || | ||| ||||| || ||| |||||||| || |||||||| | Sbjct 280752 CCTCCCCTGAGACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGAA 280693 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| |||||||||| ||||||||| || || || Sbjct 280692 AGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGA 280633 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| || | ||||| | || || Sbjct 280632 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACC 280573 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | |||||||||||| ||||| ||||| || ||||| |||||||| Sbjct 280572 TCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 280526 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| || | ||| ||||| || ||| |||||||| ||||||||||| | Sbjct 626707 CCCCCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAA 626648 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || ||||| ||||| |||||||||| ||||||||| || || || Sbjct 626647 AGAGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGA 626588 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 || || || || || ||||| || Sbjct 626587 ATACCCTCCTTATCCTGAATCTT 626565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395152815280