Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq232 158 2e-33 >seq232 Length=639093 Score = 158 bits (174), Expect = 2e-33 Identities = 884/1399 (63%), Gaps = 36/1399 (3%) Strand=Plus/Minus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| ||||| | |||||||| || ||| | || || || |||| |||||| | || || Sbjct 595394 GTAAATGTTGCTGGTGTATGGCTCGAAGGACTCGTTGTTTCCCAGGATTTGGGATGTCGA 595335 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| || | |||||| ||||| | || ||||| Sbjct 595334 TGCGGTCGGCATGGGGGCCAGGAACAACGAGTTACGCAGACCGTGCTTGGCCATGCGGCG 595275 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTC-ACCTT-----CCCACATGTCAAA 110880 ||| ||| | |||||||| | | |||| | || || | |||| | ||| || Sbjct 595274 CTTAAGATCGTCCCAGTCCCAT---AACTTGTTGTCCACAGTGGCGCCCCAAAGGTCGAA 595218 Query 110881 CTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTC 110940 ||| ||| |||| || || || || ||| | | ||||| | ||| | ||| Sbjct 595217 CTGCAGCTTGCCTTTTGAGGCTGGCGATCCCGGGTACGACTCATACGTACCATCACGTTC 595158 Query 110941 AGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATT 111000 ||||| | | | ||||| | ||| || || || || || ||||| || Sbjct 595157 GGCCAACGAAATAGACTCATCCAGACAACCGTAGTAAATCGTCTCGAATATACGGCGGTT 595098 Query 111001 CATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAG 111060 | ||||||||||| || || || || | |||||| || ||||| ||||| | Sbjct 595097 AAGTTCCTTGGCTTCCTCAGATTCGAACGGGTAGCGCATCAGCATAAAGGTGTCCGCCAA 595038 Query 111061 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACT--TTCGCG-CAGTCTC 111117 ||| || || || | ||||||||||||||| || ||| ||| ||||| | | | | Sbjct 595037 ACCCTGCACTCCTACACCAATAGGTCTGTGGCGATGATTGGACACCTTCGCCTCCGGCAC 594978 Query 111118 AACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGAT 111177 | ||||| | ||||||||||||| | ||| || || | |||| | | || Sbjct 594977 A---GGATAGTAGTTTCTGTCAATGATTTTGTTGAGGTTGTATGTAATGACACGGGAGAC 594921 Query 111178 TTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGC 111237 ||| | | |||| | || | ||||| || || | || |||||| | || || || Sbjct 594920 TTCGTACAACTTTTGGAAGTCGTACGTGCGGGTTTCCTTGTTCACATACATCGGCAGCGC 594861 Query 111238 GATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGT 111297 || || |||| ||||| || ||| ||| || |||||||| || || || Sbjct 594860 AATGGAAGCCAGGTTGCACACTGCCACCTCTTCTGGGGATGTGTACTGTACGATCTCACA 594801 Query 111298 ACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGC 111357 || | ||| || ||| || || |||| |||| ||||||| ||| ||||| || Sbjct 594800 GCACAGGTTAGATGACTTGATGGTTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCATGC 594741 Query 111358 ATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||||||| ||||| | || | || || || | || || ||||||||| ||| Sbjct 594740 ATCCTTGTAAAGCATAAAAGGGTTACCGGTTTCGATTTGACTTTGGAGAATAGCAAACCA 594681 Query 111418 AACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCC--CTCCGCC----TCGTACTTTGT 111471 || ||| || ||| | ||| || || ||| | || || || || Sbjct 594680 AAGTGTTTGGGCAGG---AATAGTTTTG---CGGCCTAAGCCGGCTTGTTCATATTTGGT 594627 Query 111472 GTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACA 111531 || | ||||| ||||| |||||| | || | || || | || || || || Sbjct 594626 ATATAACGCTTCGAACTCATCACCCCAAACATCATACAGTCCGCGGCACTCATCAGGGCA 594567 Query 111532 GAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 | || | ||| | ||| | | || || |||||||| || || || ||||||||||| Sbjct 594566 CATTAGGGTCCAGTCGCCATTTGCTTCGACACGCTTCATAAACAGATCCGGAATCCACAG 594507 Query 111592 GGATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAA 111650 | | || || || | | || || || ||| || || || || || || | Sbjct 594506 TGCATAGAATAGGTCACGTGCA-CGGCTTTCCTCGGATCCATGATTTTTCCGCAAGTCCA 594448 Query 111651 GGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCG-- 111708 |||| ||||||||||| ||||||||||| || | || | || | || ||||| || Sbjct 594447 GGAAATCCATGATATCAGCGTGCCATGGTTCCATGTATATGGCAAATGACCCCTTGCGCT 594388 Query 111709 -ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767 | ||| | || | |||||| | || || || || |||| || | |||||| | || Sbjct 594387 TGCCACCACCCTGGTCTACATACCTTGCAGTTGCATTGAATATACGCAACATTGGCACAA 594328 Query 111768 TACCATCTGAT-TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGG 111826 |||||| || | | ||||| || || || || | | |||| || | | || Sbjct 594327 TACCAT-TGCTCTTCCCATTGGTGCCACGGATGTACGCCCCACTGGCCCTTATTTTGTGA 594269 Query 111827 ATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCA 111886 | | || ||||| ||||| ||||| ||| || |||| ||| | || || Sbjct 594268 CAGGCAAGGCCTATACCGCCAGCACACTTGCTGATGAATGCGCACTGCGTCAATGTCTCA 594209 Query 111887 TAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGT 111946 ||||||| | |||||| || || | | | | ||| ||||| ||||| || || Sbjct 594208 AAGATACCAGCTAATGAGTCATCTTTCATATCCAACAAGAAACAACTCGACATTTGTGGC 594149 Query 111947 CTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACAT 112005 ||| | ||||| | || | || || || || || |||| |||| | || ||| Sbjct 594148 CTTTGGGTACCGGAGAAAAACAACGTCGGCGTAGCATGGGTGAA-ATACTTCTGACTCAT 594090 Query 112006 CTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCG 112065 | || ||||||| | | || |||||| | | ||| ||||| || || | Sbjct 594089 CAGGTGATATGTCTGAATCGTACGCTCGATGTCTCCACAGTGAATGCCTGCCGCAACTCT 594030 Query 112066 CATGAACATGTACTGTGGG 112084 ||| ||||||| ||| ||| Sbjct 594029 CATTAACATGTGCTGCGGG 594011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628027964894400