Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq232 147 3e-30 >seq232 Length=639093 Score = 147 bits (162), Expect = 3e-30 Identities = 952/1513 (63%), Gaps = 46/1513 (3%) Strand=Plus/Plus Query 104348 GGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||| | ||| || |||||||| ||||| ||| | | | | || || |||||| | Sbjct 594138 GGTACCCAAAGGCCACAAATGTCGAGTTGTTTCTTGTTGGATATGAAAGATGACTCATTA 594197 Query 104408 AACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATT 104467 ||||||| || || | ||| |||| || ||| ||||| ||||| ||||| Sbjct 594198 GCTGGTATCTTTGAGACATTGACGCAGTGCGCATTCATCAGCAAGTGTGCTGGCGGTATA 594257 Query 104468 GGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCA- 104526 || | | || | | || |||| | | || || || || ||||| | Sbjct 594258 GGCCTTGCCTGTCACAAAATAAGGGCCAGTGGGGCGTACATCCGTGGCACCAATGGGAAG 594317 Query 104527 ATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCA 104586 | || |||||||| | |||||| | || |||| || || || || | |||||| | || Sbjct 594318 AGCA-ATGGTATTGTGCCAATGTTGCGTATATTCAATGCAACTGCAAGGTATGTAGACCA 594376 Query 104587 AGCTGGGCGT---CGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATAT 104643 | ||| | || ||||| || | || | || | || ||||||||||| ||||| Sbjct 594377 GGGTGGTGGCAAGCGCAAGGGGTCATTTGCCATATACATGGAACCATGGCACGCTGATAT 594436 Query 104644 CATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CGCGATC 104702 |||||| ||||| || ||||| || || || |||||| || |||| || || | Sbjct 594437 CATGGATTTCCTGGACTTGCGGAAAAATCATGGATCCGAGGA-AAGCCGTGCACGTGACC 594495 Query 104703 TCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATT 104762 | |||| || || |||||||| ||||| || |||||| | || || | | |||| | | Sbjct 594496 TATTCTATGCACTGTGGATTCCGGATCTGTTTATGAAGCGTGTCGAAGCAAATGGCGACT 594555 Query 104763 GGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTG 104822 || | || | || || || || | || || | |||| |||||| ||||| | Sbjct 594556 GGACCCTAATGTGCCCTGATGAGTGCCGCGGACTGTATGATGTTTGGGGTGATGAGTTCG 594615 Query 104823 AAGCCCTTTACACAAAGTACGAGGAAGAAGG-TCGGGCGACTGCGACGGTGCCAGCTGCC 104881 |||| | || || || || || ||| || | ||| | || | || || || Sbjct 594616 AAGCGTTATATACCAAATATGAACAAGCCGGCTTAGGCCGC-AAAACTATTCCTGC--CC 594672 Query 104882 GA--TGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTT 104939 | | ||| ||||||||| | ||||| ||| || |||| || | ||||||| Sbjct 594673 AAACACTTTGGTTTGCTATTCTCCAAAGTCAAATCGAAACCGGTAACCCTTTTATGCTTT 594732 Query 104940 ACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCA 104999 |||| || || || || |||| ||| ||| |||| |||| |||||| || | Sbjct 594733 ACAAGGATGCATGCAATGCAAAGTCTAACCAACAGAACCTGGGAACCATCAAGTCATCTA 594792 Query 105000 ATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCG 105059 | || || || ||| | | | ||| | ||| ||| ||| ||||| ||||| | Sbjct 594793 ACCTGTGCTGTGAGATCGTACAGTACACATCCCCAGAAGAGGTGGCAGTGTGCAACCTGG 594852 Query 105060 CATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAAC 105119 | || || || || || | ||||||| | || || || | || | |||| Sbjct 594853 CTTCCATTGCGCTGCCGATGTATGTGAACAAGGAAACCCGCACGTACGACTTCCAAAAGT 594912 Query 105120 TCCACGAAGTTACGAAAACTGTC---ACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 | ||||||| | |||| || | ||||| |||| | | ||||| ||||| | Sbjct 594913 TGTACGAAGTCTC---CCGTGTCATTACATACAACCTCAACAAAATCATTGACAGAAACT 594969 Query 105177 TTTACCCCGT---TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCG 105233 || || || ||| | | || || ||| | ||| | || |||||| | | Sbjct 594970 ACTATCCTGTGCCGGAGGC-GAAGGT--GTCCAATCATCGCCACAGACCTATTGGTGTAG 595026 Query 105234 GTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAG 105293 | || |||||| | ||||| || || || ||| || | || || || || |||| Sbjct 595027 GAGTGCAGGGTTTGGCGGACACCTTTATGCTGATGCGCTACCCGTTCGAATCTGAGGAAG 595086 Query 105294 CGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT---TGAGGCGA 105350 | |||||| | || || ||||| ||||| || || ||| ||| |||| | | Sbjct 595087 CCAAGGAACTTAACCGCCGTATATTCGAGACGATTTACTACGGTTGTCTGGATGAGTCTA 595146 Query 105351 GTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 105410 ||| |||||| || ||||||| | ||||| | | ||| || ||||| ||| Sbjct 595147 TTTC---GTTGGCCGAACGTGATGGTACGTATGAGTCGTACCCGGGATCGCCAGCCTCAA 595203 Query 105411 AAGGGGTGCTTCAATTTGATATGTGGG-----AAGGT-GAGACCAAGCTTCACTACGACT 105464 |||| ||| || || || | |||| | || || | |||| | | |||| Sbjct 595204 AAGGCAAGCTGCAGTTCGACCTTTGGGGCGCCACTGTGGACAACAAGTT---ATGGGACT 595260 Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524 |||| | ||| ||| ||||| || | ||||| |||||| | || |||| | Sbjct 595261 GGGACGATCTTAAGCGCCGCATGGCCAAGCACGGTCTGCGTAACTCGTTGTTCCTGGCCC 595320 Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584 | ||||| || || || || | |||||| |||| || || || | ||| || || |||| Sbjct 595321 CCATGCCGACCGCATCGACATCCCAAATCCTGGGAAACAACGAGTCCTTCGAGCCATACA 595380 Query 105585 CGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATC 105644 | | ||||| || | | || |||||||| | | || ||| || | Sbjct 595381 CCAGCAACATTTACTACCGCCGTGTGCTTAGCGGAGAGTTCTTTGTGGTAAACCCCCACC 595440 Query 105645 TCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGA 105704 | | |||||| || | || |||||| | | | ||||||||| | | ||| Sbjct 595441 TGCTACGGGACCTCGTGGATTTAGGGCTCTGGGACGAAGCTATGAAGGA---AAAGCTGA 595497 Query 105705 AAGCGGGT---GGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGAAGTTGT 105761 || | |||||| | | || | || |||||| | | || ||| | ||| Sbjct 595498 TTGCCTATAACGGTTCCTTGAGGCACATCGAGGGTATTCCTCAACACATCAAGGACCTGT 595557 Query 105762 ACCGCACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTC 105821 || ||||| |||||||| || ||| | ||||||| ||||| ||||||||||| Sbjct 595558 ACAAGACAGTGTGGGAAATAAAACAGAAAACTATCATTGATATGGCAGCAGATCGTGGCA 595617 Query 105822 GCTTCATTGATCA 105834 || |||||||| Sbjct 595618 TATTTATTGATCA 595630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257052549360