Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq232 230 3e-55 seq190 87.8 2e-12 >seq232 Length=639093 Score = 230 bits (254), Expect = 3e-55 Identities = 1120/1754 (64%), Gaps = 66/1754 (4%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 || ||| || | || ||| |||| |||| ||||| || | | ||| || ||| | Sbjct 594012 CCGCAGCACATGTTAATGAGAGTTGCGGCAGGCATTCACTGTGGAGACATCGAGCG--TA 594069 Query 19163 CGCG--AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTT 19220 || ||||||| |||||||||| ||||||| ||||| || || |||||||| | | Sbjct 594070 CGATTCAGACATATCACCTGATGAGTCAGAAGTATTTCACCCATGCTACGCCGACGTTGT 594129 Query 19221 TCAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATG 19280 | | ||||||| | | || || |||||||| |||||| | ||| |||||| |||| Sbjct 594130 TTTTCTCCGGTACCCAAAGGCCACAAATGTCGAGTTGTTTCTTGTTGGATATGAAAGATG 594189 Query 19281 ACAGCATT-GAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCC 19339 || |||| | || |||| ||||| | | | ||||||| |||| |||||| | Sbjct 594190 ACT-CATTAGCTGGTATCTTTGAGACATTGACGCAGTGCGCATTCATCAGCAAGTGTGCT 594248 Query 19340 GGGGGTATCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACG 19399 || ||||| || | ||| || || || | ||||| | ||| ||| || Sbjct 594249 GGCGGTATAGGCCTTGCCTGTCACAAAATAAGGGCCAGTGGGGCGTACATCCGTGGCACC 594308 Query 19400 AACGGAGTAGC-CGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 || || | || | | ||||| || |||||| | || | ||||| || || ||||| Sbjct 594309 AATGG-GAAGAGCAATGGTATTGTGCCAATGTTGCGTATATTCAATGCAACTGCAAGGTA 594367 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 || ||||||| || ||||| |||||||| || || ||||| ||| | || |||||||| Sbjct 594368 TGTAGACCAGGGTGGTGGCAAGCGCAAGGGGTCATTTGCCATATACATGGAACCATGGCA 594427 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 ||| || ||||||||||||| || |||| || || || |||||| | || Sbjct 594428 CGCTGATATCATGGATTTCCTGGACTTGCGGAAAAATCATGGATCCGAGGAAAGCCGTGC 594487 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 || ||||| ||| || ||||||||||||| || || ||| || || || | Sbjct 594488 ACGTGACCTATTCTATGCACTGTGGATTCCGGATCTGTTTATGAAGCGTGTCGAAGCAAA 594547 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 | || ||| ||| |||||||| | || |||| || || || || | || || Sbjct 594548 TGGCGACTGGACCCTAATGTGCCCTGATGAGTGCCGCGGACTGTATGATGTTTGGGGTGA 594607 Query 19699 GGCGTTCAATGAGTTGTACCGGACTTACGTAGCCCAGGGCCGGTTCAAG-----AAGGTG 19753 | |||| | | ||| || | || | | || ||||| | | | || | Sbjct 594608 TGAGTTCGAAGCGTTATATACCAAATATGAA---CA-AGCCGGCTTAGGCCGCAAAACTA 594663 Query 19754 GTCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCG 19813 ||| | || || | ||| | ||| |||| || |||| ||||| | || Sbjct 594664 TTCCTGCCCAAACAC-TTTGGTTTGCTATTCTCCAAAGTCAAATCGAAACCGGTAACCCT 594722 Query 19814 TACATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATC 19873 | ||| |||||||| || || || ||||| || || ||||| | || | ||| Sbjct 594723 TTTATGCTTTACAAGGATGCATGCAATGCAAAGTCTAACCAACAGAACCTGGGAACCATC 594782 Query 19874 AAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTG 19933 ||||| || |||||||| ||| ||| | || | || || ||| || ||| Sbjct 594783 AAGTCATCTAACCTGTGCTGTGAGATCGTACAGTACACATCCCCAGAAGAGGTGGCAGTG 594842 Query 19934 TGTAATCTGGCGTCCCTGTGC-CTGCCGACTTTCGT---CAAGG---CCTCCTCCTTCGA 19986 || || ||||| ||| | ||| ||||||| | || ||||| || | | | ||| Sbjct 594843 TGCAACCTGGCTTCCAT-TGCGCTGCCGATGTATGTGAACAAGGAAACCCGCACGTACGA 594901 Query 19987 CTTTGCCAAA--TTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATC 20044 ||| ||||| |||||||| || |||| ||| | || || || || |||| Sbjct 594902 CTT--CCAAAAGTTGTACGAAGTCTCCCGTGTCATTACATACAACCTCAACAAAATCATT 594959 Query 20045 GATCGGAACTTTTACCC---GACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCG 20101 || | |||| || || | | |||||| | ||| ||| |||||| | || Sbjct 594960 GACAGAAACTACTATCCTGTGCCGGAGGCGAAG---GTGTCCAATCATCGCCACAGACCT 595016 Query 20102 ATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGAC 20161 || | | || || ||||| |||| ||| || ||| || | || | | ||||| Sbjct 595017 ATTGGTGTAGGAGTGCAGGGTTTGGCGGACACCTTTATGCTGATGCGCTACCCGTTCGA- 595075 Query 20162 GATCCCA--AGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCC 20219 ||| | | || || || ||| | || |||||| | | ||| | ||| Sbjct 595076 -ATCTGAGGAAGCCAAGGAACTTAACCGCCGTATATTCGAGACGATTTACTA--CGGTTG 595132 Query 20220 TCCTGGAATCGTGCGAACTC----GCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGG 20275 | ||||| || | | || ||| || || || |||| ||| ||| | ||| Sbjct 595133 T-CTGGATGAGT-CTATTTCGTTGGCCGAACGTGATGGTACGTATGAGTCGTACCCGGGA 595190 Query 20276 TCGCCCGCGTCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGTCACT---GAGAATGAG 20332 ||||| || || | || | || ||| ||| | ||||||| |||| || || || Sbjct 595191 TCGCCAGCCTCAAAAGGCAAGCTGCAGTTCGACCTTTGGGGCGCCACTGTGGACAACAAG 595250 Query 20333 TTTTGGAGCGCCCTCAAGGTTGAG---ATCAAGACC---CACGGGCTTCGCAACTCGTTG 20386 || ||| | | | || || || | || ||||| || || ||||||||| Sbjct 595251 TTATGGGACTGGGACGATCTTAAGCGCCGCATGGCCAAGCACGGTCTGCGTAACTCGTTG 595310 Query 20387 CTCGTCGCGCCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTC 20446 || | || |||||||||||||| ||||| |||| ||| |||| ||||||||| | ||| Sbjct 595311 TTCCTGGCCCCCATGCCGACCGCATCGACATCCCAAATCCTGGGAAACAACGAGTCCTTC 595370 Query 20447 GAGCCGTACACGACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTA 20506 ||||| ||||| | |||||| |||| || ||| || ||| |||||| | ||||| Sbjct 595371 GAGCCATACACCAGCAACATTTACTACCGCCGTGTGCTTAGCGGAGAGTTCTTTGTGGTA 595430 Query 20507 AACAAGCACCTGGTCCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAAT 20566 ||| |||||| | || ||| | | | | | | || | | || || ||| Sbjct 595431 AACCCCCACCTGCTACGGGACCTCGTGGATTTAGGGCTCTG---GGACGAAGCTATGAAG 595487 Query 20567 GAAATTGTCCGAGCC--GGCGGGAGCGTCCAGGCA----TTGGATATCCCCCAGAACCTC 20620 |||| | ||| || | | ||||| || ||| || || || || Sbjct 595488 GAAAAGCTGATTGCCTATAACGGTTCCTTGAGGCACATCGAGGGTATTCCTCAACACATC 595547 Query 20621 AAGGACATTTACAGGACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCC 20680 |||||| | |||| ||| || |||||||| |||||| | ||||| || ||||| || Sbjct 595548 AAGGACCTGTACAAGACAGTGTGGGAAATAAAACAGAAAACTATCATTGATATGGCAGCA 595607 Query 20681 GATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGC 20740 ||||| ||| | || || |||||||| |||||||| ||| ||||| | || | Sbjct 595608 GATCGTGGCATATTTATTGATCAGTCCCAATCGCTCAACATCTATCTGGAGCAGCCTTCC 595667 Query 20741 CTGGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATG 20800 | | || || | |||||| | || || ||| | ||||| |||||||| || | Sbjct 595668 TTCGGCAAACTCACGAGCATGCACTTCTATGGATGGAAGAAGGGACTCAAGACCGGGGTT 595727 Query 20801 TACTATCTGCGGAC 20814 |||||| | || || Sbjct 595728 TACTATTTACGTAC 595741 Score = 172 bits (190), Expect = 6e-38 Identities = 1098/1747 (63%), Gaps = 47/1747 (3%) Strand=Plus/Minus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || || |||||||| | || |||||||| |||||||||||||| || | |||||| ||| Sbjct 595741 GTACGTAAATAGTAAACCCCGGTCTTGAGTCCCTTCTTCCATCCATAGAAGTGCATGCTC 595682 Query 78250 GACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATG 78309 | || ||| | | || | ||||| ||||||||||||| |||||||| || || Sbjct 595681 GTGAGTTTGCCGAAGGAAGGCTGCTCCAGATAGATGTTGAGCGATTGGGACTGATCAATA 595622 Query 78310 TACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTC 78369 | || || || || ||||| || |||| | || || || ||||| | ||| Sbjct 595621 AATATGCCACGATCTGCTGCCATATCAATGATAGTTTTCTGTTTTATTTCCCACACTGTC 595562 Query 78370 CGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCA----GCGCTTGTACGCTCCC--ACCG 78423 ||| | | |||| | | || | || || | || | | | || | | Sbjct 595561 TTGTACAGGTCCTTGATGTGTTGAGGAATACCCTCGATGTGCCTCAAGGAACCGTTATAG 595502 Query 78424 GCTCGCACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCCCGG 78483 || || |||| ||| || || || |||| | | | | || ||||| Sbjct 595501 GCAATCAGCTTTTCCTTCATAGCTTC---GTCCCAGAGCCCTAAATCCACGAGGTCCCGT 595445 Query 78484 ACCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | |||||| |||| | || | |||||| ||| || ||||| ||| |||||| Sbjct 595444 AGCAGGTGGGGGTTTACCACAAAGAACTCTCCGCTAAGCACACGGCGGTAGTAAATGTTG 595385 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | ||||| |||||||| | ||||||||| |||| ||| |||| ||||| ||||||||| Sbjct 595384 CTGGTGTATGGCTCGAAGGACTCGTTGTTTCCCAGGATTTGGGATGTCGATGCGGTCGGC 595325 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGGCCG 78663 ||||| || | | | || || || ||||| ||| | || | ||| || || Sbjct 595324 ATGGGGGCCAGGAACAACGAGTTACGCAGACCGTGCTTGGCCATGCGGCGCTTAAGATCG 595265 Query 78664 TCCCAA------AATTCATTCGCCGCGATC---CCCCACATGTCCGGTTGAAGGATACCC 78714 ||||| || | || || | | ||||| | ||| || || | || Sbjct 595264 TCCCAGTCCCATAACTTGTTGTCCACAGTGGCGCCCCAAAGGTCGAACTGCAGCTTGCCT 595205 Query 78715 TCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT 78774 | || || ||||| ||| | ||| ||| || | || || | ||| | || | Sbjct 595204 TTTGAGGCTGGCGATCCCGGGTACGACTCATACGTACCATCACGTTCGGCCAA--CGAAA 595147 Query 78775 --GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCG 78832 ||||| ||| ||| ||| | | |||||| || | ||| || || | | Sbjct 595146 TAGACTCATCCAGACAACCGTAGTAAATCGTCTCGAATATACGGCGGTTAAGTTC-CTTG 595088 Query 78833 CCTTGGTCTCGT-CGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACG 78891 ||| || | |||||| || | || ||| ||| || |||| ||||| || Sbjct 595087 GCTTCCTCAGATTCGAACGGGTAGCGCATCAGCATAAAGGTGTCCGCCAAACCCTGCACT 595028 Query 78892 CCGATAGCGATCGGTCGGTGGCGCATG-TTG--CTCTTTCGGGCCGCCTCGGTC---GGG 78945 || | | | || |||| |||||| ||| ||| | | |||| |||| | | || Sbjct 595027 CCTACACCAATAGGTCTGTGGCG-ATGATTGGACACCTTCG-----CCTCCGGCACAGGA 594974 Query 78946 TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTAC 79005 || |||| | || |||| ||| ||||| || | ||| || | || |||||| Sbjct 594973 TAGTAGTTTCTGTCAATGATTTTGTTGAGGTTGTATGTAATGACACGGGAGACTTCGTAC 594914 Query 79006 AATTTGGCGAAATCAAAAT----GATTTCCTT--TGATGAAAGTCGGTAG-GCACAGCGA 79058 || || ||| || | | ||||||| | | | |||| || ||| | || Sbjct 594913 AACTTTTGGAAGTCGTACGTGCGGGTTTCCTTGTTCACATACATCGGCAGCGCAATG-GA 594855 Query 79059 TGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAA 79118 |||||||||||||| ||| ||| || ||| | || | ||| || ||||| Sbjct 594854 AGCCAGGTTGCACACTGCCACCTCTTCTGGGGATGTGTACTGTACGATCTCACAGCACAG 594795 Query 79119 ATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTT 79178 ||||| ||||||||||| || | ||||| ||||| ||| | || || || ||||| Sbjct 594794 GTTAGATGACTTGATGGTTCCCAGGTTCTGTTGGTTAGACTTTGCATTGCATGCATCCTT 594735 Query 79179 GTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTC 79238 ||| ||| | || | ||||| || | ||||| | ||||| | ||| | || Sbjct 594734 GTAAAGCATAAAAGGGTTACCGGTTTCGATTTGACTTTGGAGAATAGCAAACCAAA-GTG 594676 Query 79239 CCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGA-CGTACGTCCGGTACAACTCGT 79297 || | ||| | || | | | || | | | || | || ||| | | Sbjct 594675 TTTGGGCAGGAATAGTTTTGCGGCCTAAGCCGGCTTGTTCATATTTGGTATATAACGCTT 594616 Query 79298 TGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCC 79357 ||| | || || | ||||| ||| || ||||||| | |||||||| ||| || Sbjct 594615 CGAACTCATCACCCCAAACATCATACAGTCCGCGGCACTCATCAGGGCACATTAGGGTCC 594556 Query 79358 AGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGA 79417 |||| | | || || || ||| || || ||||| |||||||| || ||| | Sbjct 594555 AGTCGCCATTTGCTTCGACACGCTTCATAAACAGATCCGGAATCCACAGTGCATAGAATA 594496 Query 79418 GGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGA 79477 |||| || ||| | |||||| || || || |||| || || || ||||||| Sbjct 594495 GGTCACGTGCACGGCTTTCCTCGGATCCATGATTTTTCCGCAAGTCCAGGAAATCCATGA 594436 Query 79478 TGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCT 79537 | || |||||||| || |||| || ||||| || || |||||||||||||| || |||| Sbjct 594435 TATCAGCGTGCCATGGTTCCATGTATATGGCAAATGACCCCTTGCGCTTGCCACCACCCT 594376 Query 79538 GGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA 79597 ||| || |||| || || ||||| | || | ||| ||||| || || | | Sbjct 594375 GGTCTACATACCTTGCAGTTGCATTGAATATACGCAACATTGGCACAATACCATTGCTCT 594316 Query 79598 CGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGA 79657 || || || || ||| | || || |||| || || ||| | || | Sbjct 594315 TCCCATTGGTGCCACGGATGTACGCCCCACTGGCCCTTATTTTGTGACAGGCAAGGCCTA 594256 Query 79658 TGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGA 79717 | || || | |||||| |||| ||||||| | | | ||||| |||| || | | Sbjct 594255 TACCGCCAGCACACTTGCTGATGAATGCGCACTGCGTCAATGTCTCAAAGATACCAGCTA 594196 Query 79718 TCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGG 79777 ||||| || |||||| | | || ||| || |||||||| ||||| | | ||||||| Sbjct 594195 ATGAGTCATCTTTCATATCCAACAAGAAACAACTCGACATTTGTGGCCTTTGGGTACCGG 594136 Query 79778 CGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCT 79837 | || | |||||||| || || ||||| |||| || |||||||| | || |||| Sbjct 594135 AGAAAAACAACGTCGGCGTAGCATGGGTGAAATACTTCTGACTCATCAGGTGATATGTCT 594076 Query 79838 CCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACT 79897 | ||| || ||| | | ||| ||||| |||| || | ||| || | || || Sbjct 594075 GAATCGTACGCTCGATGTCTCCACAGTGAATGCCTGCCGCAACTCTCATTAACATGTGCT 594016 Query 79898 G-GGGCG 79903 | ||||| Sbjct 594015 GCGGGCG 594009 >seq190 Length=1127857 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 |||| ||| ||||||||| ||||||||||| || |||||||| || |||||| | Sbjct 499077 GCTTACGCAGCCGTGGAAGGTATCTTCTTCTCAGGTAGCTTCTGTGCAATATTCTGGTTG 499136 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 ||||| ||||| || ||||| || || | ||| ||| ||||| || || |||| ||| Sbjct 499137 AAAAAACGTGGGCTTATGCCAGGGCTCACGTTCAGCAATGAGCTAATATCGAGGGATGAG 499196 Query 60111 GGCCTCCA 60118 || || || Sbjct 499197 GGACTTCA 499204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548521275728160