Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq190 111 1e-19 >seq190 Length=1127857 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||| | ||| | || |||||||||||||||||||| || || || || Sbjct 281392 GCCACCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGA 281333 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | |||||||| || || || ||||| || | |||||| ||||| || || Sbjct 281332 AAGGGTGCGACCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGG 281273 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| || ||| || | || ||| | || ||||| | ||| | Sbjct 281272 AATACCCTCCTTATC-CTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGA 281214 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 | |||| || || ||||| ||||| || || || || || || |||||| || Sbjct 281213 CCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCATGGTG 281161 Score = 102 bits (112), Expect = 5e-17 Identities = 164/233 (70%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||| | ||| | || || |||||||||||||| || || || || || Sbjct 280753 GCCTCCCCTGAGACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGA 280694 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | |||||||| || || || ||||| || | |||||| ||||| || || Sbjct 280693 AAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGG 280634 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCA 34657 | |||||||| || ||| || | || ||| | || ||||| | ||| | Sbjct 280633 AATACCCTCCTTATC-CTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGA 280575 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710 | |||| || || ||||| ||||| || || || || || || |||||| || Sbjct 280574 CCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCATGGTG 280522 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || || ||||| | ||| | || ||||||||||||||||| ||||| || || || Sbjct 626708 GCCCCCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGA 626649 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | |||||||| || || || ||||| || | |||||| ||||| || || Sbjct 626648 AAGAGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGG 626589 Query 34599 CACTCCCTCCTTGTC 34613 | |||||||| || Sbjct 626588 AATACCCTCCTTATC 626574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314727628415762