Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq190 140 8e-28 >seq190 Length=1127857 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||| ||| |||||||| || || || | |||||| | |||||| Sbjct 280737 AGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTCAGAAAGGGTGCGGCCATCT 280678 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || || || || ||||| || |||| || ||||| ||| Sbjct 280677 TCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 280618 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||||||||| |||||| | || ||||| | ||| || || Sbjct 280617 TGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTT 280558 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||||||| || | ||||| Sbjct 280557 TTGCCGGTCAAAGTCTTTACGAATATTTGCAT 280526 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||||||| ||| ||||| || || || || | |||||| | |||||| Sbjct 281376 AGCACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCT 281317 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || || || || ||||| || |||| || ||||| ||| Sbjct 281316 TCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 281257 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||||||||| |||||| | || ||||| | ||| || || Sbjct 281256 TGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTT 281197 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||||||| || | ||||| Sbjct 281196 TTGCCGGTCAAAGTCTTTACGAATATTTGCAT 281165 Score = 131 bits (144), Expect = 4e-25 Identities = 140/185 (76%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||||||| ||| ||||||||||| || |||| ||| || | |||||| Sbjct 626692 AGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAAAGAGTACGGCCATCT 626633 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || || || || ||||| || |||| || ||||| ||| Sbjct 626632 TCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 626573 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||||||||| |||||| | || ||||| | || || ||| Sbjct 626572 TGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAGGTAATGGTC 626513 Query 211083 TTTCC 211087 || || Sbjct 626512 TTACC 626508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144366259610