Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq190 102 7e-17 >seq190 Length=1127857 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||| | || || |||||||| ||||| ||||| || || Sbjct 280756 CATGCCTCCCCTGAGACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTC 280697 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 | ||| || || | || |||||||| ||||||||||| || |||||||||||||| | Sbjct 280696 AGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGG 280637 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | | ||| || ||| || || |||| | | | || || || | ||| Sbjct 280636 GGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTC 280577 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || |||| || || |||| || |||| || || || || |||||||| Sbjct 280576 GACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCAT 280526 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || |||||||| ||||| ||||| || || | ||| || || | || |||||||| Sbjct 281367 TGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCAAGCTGC 281308 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||||||||| || |||||||||||||| | ||| | | ||| || ||| || || Sbjct 281307 TTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTG 281248 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 |||| | | | || || || | ||| || |||| || || |||| || ||| Sbjct 281247 GCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTTGCCGGTC 281188 Query 39262 AGCGTTTTAACAAAGATTTGCAT 39284 | || || || || |||||||| Sbjct 281187 AAAGTCTTTACGAATATTTGCAT 281165 Score = 86.0 bits (94), Expect = 5e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 39056 AGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGG 39115 |||| || || | || | ||| | || || |||||||| ||||| || || || || | Sbjct 626709 AGCCCCCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCG 626650 Query 39116 CAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGG 39175 ||| || || | || |||||||| ||||||||||| || |||||||||||||| | || Sbjct 626649 AAAGAGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGG 626590 Query 39176 GCACGCTCTCTTTGTCC 39192 | | | ||| || ||| Sbjct 626589 GAATACCCTCCTTATCC 626573 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429542909165282