Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20divergens_20[genbank_20GCA_5F001077455.1_202014-09-06] 514 sequences; 10,797,556 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq190 131 1e-25 >seq190 Length=1127857 Score = 131 bits (144), Expect = 1e-25 Identities = 170/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || || || | | ||| |||||||| ||||||||||||||||| ||||| || Sbjct 280756 CATGCCTCCCCTGAGACGAAGCACTAGGTGAAGTGTGCTCTCCTTTTGGATATTGTAGTC 280697 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || || |||||||| || ||||| |||| ||||||||| |||| Sbjct 280696 AGAAAGGGTGCGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGG 280637 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | ||| ||||| ||| ||||| ||| | || | || ||||| || || Sbjct 280636 GGGAATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTC 280577 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||||| ||||| || || || || | ||||| ||||| ||||||||| || Sbjct 280576 GACCTCCAAAGTAATGGTTTTGCCGGTCAAAGTCTTTACGAATATTTGCATGGTG 280522 Score = 125 bits (138), Expect = 5e-24 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| |||||||| |||||||||||||| || ||||| || | || ||| | || || Sbjct 281374 CACTAGGTGAAGAGTGCTCTCCTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTC 281315 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| || ||||| |||| ||||||||| |||| || | ||| ||||| ||| Sbjct 281314 AAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTG 281255 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || | || ||||| || || ||||||| ||||| || || Sbjct 281254 AATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACCTCCAAAGTAATGGTTTT 281195 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || || | ||||| ||||| ||||||||| || Sbjct 281194 GCCGGTCAAAGTCTTTACGAATATTTGCATGGTG 281161 Score = 113 bits (124), Expect = 3e-20 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 ||||| || || | | ||| |||||||| ||||||||||||||||||||||| || | Sbjct 626707 CCCCCCCTGAGACGAAGCACTAGGTGAAGAGTGCTCTCCTTTTGGATGTTGTAGTCCGAA 626648 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || | || || |||||||| || ||||| |||| ||||||||| |||| || Sbjct 626647 AGAGTACGGCCATCTTCAAGCTGCTTGCCCGCAAAAATCAGACGCTGCTGGTCTGGGGGA 626588 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| ||||| ||| | || | || ||||| || || ||| Sbjct 626587 ATACCCTCCTTATCCTGAATCTTGGCCTTGACGTTTTCGATAGTGTCACTGGGCTCGACC 626528 Query 44291 TCCACCGTAATCGTCTTTCC 44310 |||| ||||| ||||| || Sbjct 626527 TCCAAGGTAATGGTCTTACC 626508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988144885138