Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq231 95.1 1e-14 seq131 95.1 1e-14 seq114 95.1 1e-14 >seq231 Length=155543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 286/434 (66%), Gaps = 12/434 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 || || |||||||||| ||||| | || || |||| |||||| | |||||| | || Sbjct 73522 TTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCCA 73463 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 || || || || ||||||| | ||||| || || | ||| || |||| | ||| Sbjct 73462 GTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACAACTTGGCATATGTAGGC 73403 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 |||||||| | || | ||| ||| ||| || || || || || |||||||| ||| Sbjct 73402 TGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCTGCC 73343 Query 22286 ATATTTATCAATG--TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCT 22343 || | || | | | | | || | ||||||||||| |||||||| | | | | || Sbjct 73342 ATGTCAATTATCGCCTTCTGTTTGA--TCTCCCATACGGTTTTGTACAGATTCTTTAGCT 73285 Query 22344 CTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATT---TT 22400 || ||||| ||||| | || | || ||| | || | || || || || Sbjct 73284 CTTGTGGTATTTCATCGATGTTTTGTAAACTTCCATTA-TATGCA--ATTAATTTTTGTT 73228 Query 22401 TAATCGTATCGTTCCACA-AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACC 22459 | || || ||||| | | || || | |||||| || | | ||| | || || Sbjct 73227 TCATTTGGTCATTCCAGAGATCCAATTG-AACCAAATCATTCAATAAATGGGGATTTACA 73169 Query 22460 ACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAA 22519 || ||| ||||| || | |||||| || | ||||| ||| | ||| | ||||| ||| Sbjct 73168 ACGAAAAATTCGCCAGAAAGGACGCGACGATAATAAATATTGCAAGTGTAAGGTTCAAAA 73109 Query 22520 GATTCATTGTTTCC 22533 ||||| ||||||| Sbjct 73108 GATTCGCTGTTTCC 73095 >seq131 Length=192580 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| |||||||| || ||||| || || || || ||||| || ||| | || || ||||| Sbjct 118458 AAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACC 118517 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || | | | |||| || || | || |||||||| || | || ||||| Sbjct 118518 TAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGA 118577 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC--TCTATGACTATGAGCGAT 31366 || || || ||||| || ||||| ||||| ||||| ||| || ||| | || || Sbjct 118578 TCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAG--AT 118635 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||||||| ||||| |||||||| ||||| | || | || ||||| || || Sbjct 118636 TATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 118688 >seq114 Length=443145 Score = 95.1 bits (104), Expect = 1e-14 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 57990 GCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATTTTGGATGAAGAAACG 58048 || || ||||| || || |||||||| ||||| |||| || |||||||| |||| ||||| Sbjct 401528 GCAGTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCA-TATTTTGGCTGAAAAAACG 401586 Query 58049 CGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCA 58108 ||| || |||||||| || || ||| |||||| | || || | ||||||||||| || Sbjct 401587 CGGGCTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCAGGGACGAGGGTCTACA 401646 Query 58109 TACTGATTTTG 58119 | || |||| Sbjct 401647 CGCCGAGTTTG 401657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765096133280