Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq131 201 3e-46 seq87 192 1e-43 >seq131 Length=192580 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| ||||| | |||| || | || ||||| || || || ||||| || || Sbjct 118689 TCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGA 118630 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || | |||||| || | ||||||||||||||||||||| | |||||||| || || Sbjct 118629 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 118570 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 ||||| || || || |||||||| || ||||||||||| | ||||| |||||||| || Sbjct 118569 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 118510 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||| || || || || ||||| |||||||||||||||||||| |||||||| Sbjct 118509 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 118459 >seq87 Length=54381 Score = 192 bits (212), Expect = 1e-43 Identities = 165/204 (81%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| || ||||| ||||| |||||||| ||||| || ||||| | |||||||||||||| Sbjct 38341 ATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCTTCTAGTTG 38282 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 || ||||||||||| || | ||||||||||| || ||||| || |||||||||||||| Sbjct 38281 CTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCCTGAATCTT 38222 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || || |||||||| | ||||| || || ||||| || | ||| || || ||||| || Sbjct 38221 AGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTTTTACCCGT 38162 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 |||||||| |||||||| ||||| Sbjct 38161 GAGTGTTTTCACAAATATTTGCAT 38138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151394947963672