Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq131 138 2e-27 seq87 134 2e-26 >seq131 Length=192580 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||| |||||||| || | ||| ||||| || | || | || || || |||||| Sbjct 118694 ATAACTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAA 118635 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 ||||| | | || |||| ||||||||||| ||||||||||||| || ||||| || Sbjct 118634 TCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCG 118575 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 || || ||||| || || ||||| || ||| |||||||| |||||||| | | Sbjct 118574 GGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGT 118515 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 || || || || || ||||||||||| || | |||||| | ||||| |||||||| Sbjct 118514 TCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 118459 >seq87 Length=54381 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 171858 AATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCA 171917 || || ||||| ||||||| |||||| |||||| || ||||| | || || |||| Sbjct 38349 AACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCT 38290 Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977 || | ||| |||||||||||||| | || ||||| |||||||| ||||| || ||||| Sbjct 38289 TCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCC 38230 Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037 || || ||| || ||||| |||||||| | |||||||| | || |||||| Sbjct 38229 TGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTT 38170 Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || | |||||| | ||||| ||||| Sbjct 38169 TTACCCGTGAGTGTTTTCACAAATATTTGCAT 38138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905133352477200