Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650055.1_202016-05-23] 234 sequences; 6,630,005 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq131 118 7e-22 seq87 113 3e-20 >seq131 Length=192580 Score = 118 bits (130), Expect = 7e-22 Identities = 172/241 (71%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 23600 AATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAG 23659 || || | |||||||| || || || ||||| || ||||| ||||| || || || || | Sbjct 118451 AACTAGTAAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGG 118510 Query 23660 TTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTAC 23719 | || | | || ||| |||||| |||| || ||| ||||| || || | | Sbjct 118511 TGGAACCTAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTC 118570 Query 23720 CGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG--CACTTT 23777 | || |||||||| || |||| ||||| || |||||| |||| |||| || |||||| Sbjct 118571 CCCCCGATCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTT 118630 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | |||| ||||||||||| || || || | || ||||| |||||| || |||| || Sbjct 118631 CAG--ATTATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 118688 Query 23838 A 23838 | Sbjct 118689 A 118689 >seq87 Length=54381 Score = 113 bits (124), Expect = 3e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || || ||||| |||||||| ||||| ||||| | ||||| || ||| Sbjct 38138 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 38197 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| | |||| | |||| | || | || || || || || | || || ||||| Sbjct 38198 GATACTATCGAAAATGTTAAGGCTAAGA-TTCAGGATAAGGAGGGAATTCCACCTGATCA 38256 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || | || ||||| || || ||||| ||||||| |||||| | || ||||| Sbjct 38257 ACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAA 38316 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || ||||||||||| || || ||||| || || || || || || ||| Sbjct 38317 TATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGGA 38365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338008636038872