Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23]
82 sequences; 6,346,114 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq45 109 5e-19
>seq45
Length=276350
Score = 109 bits (120), Expect = 5e-19
Identities = 156/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 139553 AAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA--GT 139610
|| |||||||||| ||| || || ||||| |||||||||| || | ||| ||| ||
Sbjct 157683 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTGAAAGTGTACGACCGT 157740
Query 139611 CTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 139670
| || | ||||| |||||| | || || ||||| |||||||| || || || || ||||
Sbjct 157741 CCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGT 157800
Query 139671 CGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
| ||| | || | |||| | ||| | || || | || |||||||||| ||| |
Sbjct 157801 C-TTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATG 157859
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| || || || | |||||||| |||||||||||
Sbjct 157860 GTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 157894
Score = 102 bits (112), Expect = 8e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || ||||| | ||| || || || | ||||||||||||||||| || || || |
Sbjct 45781 CCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGAC 45840
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| |||||| || || ||||||||| | ||||| ||||| ||||| || ||
Sbjct 45841 AGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGA 45900
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || || || || ||| | || | ||| | | ||| | || || ||||||| ||
Sbjct 45901 ATTCCCTCCTTATC-CTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTAC 45959
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAG 139766
|| | || | || || || || | ||||| || |||||||||||||
Sbjct 45960 TTCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCATAG 46009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063491534400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |