Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq45 98.7 7e-16 >seq45 Length=276350 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 || ||||||| |||||||| || || ||||| || ||||| || |||||||| | Sbjct 157668 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATC-TGA 157726 Query 43955 AATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || ||| | || |||||||||||||| ||||| || | ||||| || || | || Sbjct 157727 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 157786 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || ||| ||| || || || | ||| |||||| || ||||| Sbjct 157787 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 157846 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| || | || || |||||||||||||| Sbjct 157847 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 157894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354777245444136