Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq45 201 3e-46 >seq45 Length=276350 Score = 201 bits (222), Expect = 3e-46 Identities = 183/231 (79%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 104332 TCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGA 104391 ||| ||||| ||||| | |||| || | || ||||| || || || ||||| || || Sbjct 157667 TCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGA 157726 Query 104392 TAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGG 104451 || || | |||||| || | ||||||||||||||||||||| | |||||||| || || Sbjct 157727 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 157786 Query 104452 TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTAC 104511 ||||| || || || |||||||| || ||||||||||| | ||||| |||||||| || Sbjct 157787 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 157846 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 ||| || || || || ||||| |||||||||||||||||||| |||||||| Sbjct 157847 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 157897 Score = 192 bits (212), Expect = 1e-43 Identities = 165/204 (81%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 104356 ATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTG 104415 ||| || ||||| ||||| |||||||| ||||| || ||||| | |||||||||||||| Sbjct 45804 ATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCTTCTAGTTG 45863 Query 104416 TTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTT 104475 || ||||||||||| || | ||||||||||| || ||||| || |||||||||||||| Sbjct 45864 CTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCCTGAATCTT 45923 Query 104476 TGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535 || || |||||||| | ||||| || || ||||| || | ||| || || ||||| || Sbjct 45924 AGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTTTTACCCGT 45983 Query 104536 AAGTGTTTTTACAAATATCTGCAT 104559 |||||||| |||||||| ||||| Sbjct 45984 GAGTGTTTTCACAAATATTTGCAT 46007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397190312056