Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq45 132 4e-26 >seq45 Length=276350 Score = 132 bits (146), Expect = 4e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || |||||||||||||| || || | || |||||| |||||||| | ||||| ||| | Sbjct 46010 ACTATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCC 45951 Query 25056 TCTGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| |||||||| | ||| | || | ||| || || || || ||||||||||| Sbjct 45950 AGTGATACTATCGAAAATGTTAAGGCTAAGATTCAG-GATAAGGAGGGAATTCCACCTGA 45892 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | |||||||| || || ||| ||||||| | |||||| || || || Sbjct 45891 TCAACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTA 45832 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 ||||||||||||||| || || | ||||| ||| | || || | || ||| Sbjct 45831 CAATATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGGA 45780 Score = 125 bits (138), Expect = 6e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || |||||||||||||||||| || | || |||||| |||| || | || ||||| | Sbjct 157898 AAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACC 157839 Query 25055 GTCTGACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 ||| ||||| || | || || || | ||| ||||| || || ||||| || | Sbjct 157838 TAGTGATACTATTGAAAATGTAAAGGCTAAGATTCA-AGACAAGGAGGGAATTCCCCCCG 157780 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 | ||||| || | |||||||| || |||||||| || || | ||| || | |||| Sbjct 157779 ATCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATT 157720 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGA 25226 | || || ||||| ||||| ||||| || |||||| ||||||| ||||| ||| Sbjct 157719 ATAACATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGA 157667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327566942830