Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq58 313 3e-80 seq14 147 3e-30 >seq58 Length=597893 Score = 313 bits (346), Expect = 3e-80 Identities = 1074/1661 (65%), Gaps = 40/1661 (2%) Strand=Plus/Plus Query 6508 TTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC---CTTTTTCGCGTA 6564 ||||||| |||||| ||||| || || ||||||| | || || | | ||| | Sbjct 218046 TTTCATTGAATAACAATAGTTCTCAAGTTCATTCTTGGATTCAACACACCTCTTC---TT 218102 Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||||||||| || || || |||| || || || |||||| | |||||||||| | Sbjct 218103 CTTTTCATCATCTTCCCTAAACTTCTCTGCTTCAGCAACCATCCTATCAATGTCTTGCTG 218162 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||| ||||| || || || | | ||| | || || | | ||| || Sbjct 218163 TGAAAGTCTTCCCTTGTCATTTGTTATAGTTACATGTTCAGTCTTTCCTGTCGACTTGTC 218222 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| || |||| |||||||| ||||| | || || | || ||||| || || Sbjct 218223 GGCAGCAGACACTGTCAATATACCATTGGCATCGATGTCAAAGGTGACTTTAATCTGGGG 218282 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || || || | || || || || |||| ||| | || |||||| |||| || Sbjct 218283 AACTCCTCTTGGAGCAGGAGGTATGCCAGTCAAATGGAATTTGCCTAGTAAATTGTTGTC 218342 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| |||| | || | ||| | | ||| |||| || Sbjct 218343 ACATGTCATAGAACGTTCTCCTTCGAAGACCTGGATCATAACCCCCGTTTGGTTATTTTC 218402 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| || |||||| ||||| | || || || |||||||| || || | | Sbjct 218403 ATTGGTTGTAAATTCTTGTTCCTTCTTGGCGGGGATAGTAGTATTTCTGGGTATCAGCAC 218462 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || || || ||||| || ||||| || || || || | |||| Sbjct 218463 GGTCATAACACCGCCGGCGGTCTCAAGTCCTAGTGACAGTGGAGTGACATCTA---GTAA 218519 Query 6985 CAGG---TCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 ||| ||||| || ||||| ||| || ||||| || || || || || Sbjct 218520 CAGTAAATCTTGGACCTTGCTAGATTG------TTCGCCAGTTAAAATTGCAGCCTGAAC 218573 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||| || || || || || || || |||||||| | ||| ||||||| || || Sbjct 218574 AGCCGCGCCATAGGCTACTGCTTCGTCTGGGTTAATTGATTTGCAGGGTTCTTTGCCATT 218633 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 ||| | ||| | || ||| || || || ||||| || ||||| || || || | || Sbjct 218634 GAAAAAGTCCTTAATCAATTGCTGTATCTTAGGGATACGGGTCGAACCTCCTACAAGTAC 218693 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTT 7214 | ||||| | | | ||||| || | || || | ||| | ||||||||| || Sbjct 218694 CACTTCATGGATCTGCTTCTTATCCATATCTGCATCAGCTAAG-GCTTTTTCGACTGGGA 218752 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | || ||||| || ||| || ||||| || | || | || ||| Sbjct 218753 TTAAAGTGTTTTTGAACATTTCGGCACAGAGCTCCTCGAATCTGGCCCTAGTGATGTTGC 218812 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | | | || | ||| || ||| | || | |||| || | |||| | | Sbjct 218813 AACTGTAGTCGATGCCATCAAATATAGCTTCTACAACAATCGTGGCCTGTGTTGAGTGGG 218872 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 |||| || || || || || ||||| |||| | | ||| | ||||| || Sbjct 218873 ATAAGGTGCGTTTAGCACGTTCACATTGTGTTCTAAGTCTACGTAATGCACGTCTATTGG 218932 Query 7395 CGGAAATATCTTTCTT---ATGTTTACGTTTAAACTCTTCAGAG-AAGTGTCGAAGGAGT 7450 ||||||| ||| || || || ||||| || || | || || || | | Sbjct 218933 TTGAAATATTCTTCCCGCCATTCTTTCGCTTAAAGTCATCTACGCAAAAGTTGACCAA-T 218991 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || || ||||| |||||||| ||||| || || || || || ||||| Sbjct 218992 CTGTTGTCAAAGTCCTCACCGCCCAAGTGGGTATCACCTTGTGTGGCCTTTACCTCAAAA 219051 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || |||| || |||| | || ||||| || || ||||| |||| || ||||| Sbjct 219052 ATGCCATCTTCGATAGTTAAAATTGATACATCGAAAGTGCCACCGCCCAAATCGAAAATC 219111 Query 7571 AGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | || || | || | || | ||||| || | ||| || || || || || || || Sbjct 219112 AACACATTTTTTTCAGAAGTACCT-TTCTTGTCCATACCATAGGCAATTGCGGCAGCAGT 219170 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| |||||||| | | || | |||||||| || | || || || || || Sbjct 219171 TGGTTCATTGATAATACGCATAACATTTAACCCAGCAATGGTACCAGCGTCCTTAGTGGC 219230 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| ||||||||||| || || || || || | || || | | || | |||| Sbjct 219231 CTGTCGTTGAGAATCGTTAAAATAAGCGGGTACAGTGATAACAGCATTAGAGATTGTCTT 219290 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| ||||| || || || ||||| ||||| || ||||| || || || || || Sbjct 219291 TCCCAAATAAGATTCTGCAATTTCCTTCATCTTGGTGAGGACCATAGAAGATATTTCCTC 219350 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || ||| |||||||| | ||| | || | |||| || ||||| | Sbjct 219351 TGGGTGGAAGGATTTAGTTTCACCCTGAAATTGTACCTTGATCACAGGCTTATCATTTGG 219410 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG--TCCGAA 7927 || | ||| || | | ||| | ||| ||||| ||||| || || || Sbjct 219411 TCCAGCCGCAACAGTAAATGGCCAGTGTTTTATATCACTTTGGA--TGCAGGGATCATTG 219468 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 | |||||| || || | | |||||||||||||||||||||| || || | || Sbjct 219469 ATCTTTCTCCCTATCAATCTTTTTGCATCAAAAACTGTGTTTTCAGGATTTCTAGCATCC 219528 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || ||||| || | | || || | || || || || || || || Sbjct 219529 TGATTTTTGGCGGCGTCGCCAACCAATCGCTCCACA---TCAGTGAAGGCAACATAAGAC 219585 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || || || || ||||| || || || ||||||||||| || |||| ||| ||| Sbjct 219586 GGAGTTGTACGGTTGCCTTGATCATTGGCTATAATTTCTACAGTTTCATTTTTCCAAACG 219645 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| |||||||| || || || Sbjct 219646 CCAACACATGAGTAAGTGGTTCCCAAATCAATCCCAATAGC 219686 >seq14 Length=15907 Score = 147 bits (162), Expect = 3e-30 Identities = 239/339 (71%), Gaps = 9/339 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||||||||| || | ||| ||||| || | |||||| |||||||||| | ||| Sbjct 11087 ATCAAAATCTTCACCGCCGAGGTGAGTATCTCCTGATGTCGCTATGACTTCAAATACACC 11028 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||| | | | ||||||||||| ||||||||||| || ||| | | | | Sbjct 11027 GTTGTCAATTGTAAGTAGGGAAACATCAAAAGTACCACCACCGAGATCATAGACCAAAAT 10968 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || || || || || ||||| || || ||||| || || || ||||| Sbjct 10967 ATTTTTTTCTTCATC---CTTATTGTCAAGACCATAAGCAATAGCAGCGGCTGTGGGTTC 10911 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 ||| | ||||| || ||| |||| |||||||| ||| | |||||||| || ||||| Sbjct 10910 ATTGAGTATACGTAATACA-TTCAAACCAGCAAT--TTGACCTGCATCTTTGGTAGCTTG 10854 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||| ||||| || || || || || || || || | | ||| ||| ||| Sbjct 10853 GCGCTGGGCATCATTAAAATATGCAGGAACTGTCACAACGGCATTTTTAACTGTCTGACC 10794 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 |||| | ||| || || |||||||||| ||| || Sbjct 10793 GAGAAAGTTTTCGGCCATGCTCTTCATTTTGGAAAGCAC 10755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132148988880