Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq73 174 2e-38 >seq73 Length=143992 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 51082 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 51023 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 51022 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 50963 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 50962 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 50904 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 50903 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 50844 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 50843 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 50784 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 50783 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 50724 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 50723 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 50664 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 50663 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 50604 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || ||| || Sbjct 50603 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGA-GG 50545 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 50544 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 50486 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 50485 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 50426 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 50425 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 50367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975396299600