Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq73 114 2e-20 >seq73 Length=143992 Score = 114 bits (126), Expect = 2e-20 Identities = 321/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Plus Query 75257 GACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGC 75315 || |||||| || | ||||||| ||| | | |||||| ||| || || || ||||| Sbjct 50319 GATATTGATCGTGCCATGGAGACTTACAATTACATGTCC-AAGAAATTATTTATCCACGC 50377 Query 75316 AACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTAT 75375 || || || |||||||| |||| || | || || ||||| || ||||||||| | Sbjct 50378 CACTCCCACACTCTTCAACTCTGGAACTAAATTTCCTCAAATGTCTAGCTGCTTCCTTCT 50437 Query 75376 CGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAAT 75435 | | ||||| || || || ||||| | || || ||||| | ||||| | || Sbjct 50438 TGATATTAAGGATGATTCTATTTCTGGTATTTTTGACACCCTTACCCAATGTGCACTCAT 50497 Query 75436 CTCAAAGTGGGCTGGGGGTATTGGGAT-GCACATCCATGATGTGAGAGCCAATAAATCTC 75494 ||| || || || || || | ||| || || | | | ||| | || Sbjct 50498 TAGTAAGACAGCAGGAGGGATAGGTTTAGCA-ATACACAAAATACGTGCCTCCAGTTCAT 50556 Query 75495 GTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACG 75554 ||||| || |||||||| || || |||| ||||| || ||||| | |||| || | Sbjct 50557 ACATTCGCGGCACAAATGGGCATTCCAATGGGATTATACCTATGCTCAGAATATTCAATG 50616 Query 75555 CCACAGCGCGCTATGTAAATCAAGCGGGGCGTC---GCAAGGGGTCCATCGCGGTCTACT 75611 || || || ||||| |||| | ||| | | || || || | || ||||| Sbjct 50617 ATACTGCTCGTTATGTTGATCAGGGAGGGGGAAAAAGAAAAGGTTCATTTGCCATCTACC 50676 Query 75612 TGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACG 75671 | || ||||||||||| ||||| | || ||||| || ||||| ||||| ||| | Sbjct 50677 TAGAGCCATGGCATGCTGATATTTTTGAATTCCTAGATCTACGAAAAAACCATGGTTCAG 50736 Query 75672 AAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGC 75731 | ||| | || ||| || | || | | ||||||| ||||||||||||||||| Sbjct 50737 AGGAGTCAAGGGCTAGGGACTTGTTCTATGCATTGTGGATCCCAGACCTTTTCATGAAAA 50796 Query 75732 GGGTTGA 75738 ||||||| Sbjct 50797 GGGTTGA 50803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568988516160