Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq45 140 6e-28 >seq45 Length=276350 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 192303 AATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATA 192362 ||||| |||||||| || | ||| ||||| || | || | || || || ||||| Sbjct 157661 AATAACTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATA 157720 Query 192363 ATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATC 192422 ||| || | ||| || | || ||||||||||| |||||||| |||| || |||||||| Sbjct 157721 ATCTGAAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATC 157780 Query 192423 AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGA 192482 || || ||||| || || ||||| || ||| |||||||| |||| ||| | Sbjct 157781 GGGGGGAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGG 157840 Query 192483 TTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||| || || || || ||||||||||| || | |||||| | |||||| |||||||| Sbjct 157841 TTCCACCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 157897 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || ||||| ||||||| |||||| ||||| || || || | || || | || Sbjct 45796 AACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGACAGAGTGCGGCCGTCT 45855 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | ||| ||||||||||| || | || |||||||||||||| ||||| || ||||| Sbjct 45856 TCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGAATTCCCTCCTTATCC 45915 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || || ||| || ||||| |||| ||| | |||||||| | || |||||| Sbjct 45916 TGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACTTCCAATGTGATGGTT 45975 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || | |||||| | |||||| ||||| Sbjct 45976 TTACCCGTGAGTGTTTTCACAAATATTTGCAT 46007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984478965680700