Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq45 111 2e-19 seq73 86.0 6e-12 >seq45 Length=276350 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||| ||||| || | ||||| | ||| ||||| ||||||||||| ||||| || || Sbjct 157667 TCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGA 157726 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || || ||| || | ||||| || |||||||| | || || |||||||| || Sbjct 157727 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 157786 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || || || |||||||| || || || || | || || | |||||| Sbjct 157787 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 157846 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||||||||| || | ||||| || || ||||||||||| Sbjct 157847 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 157897 >seq73 Length=143992 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 9090 TAAAGAG-CTGTATAAAACCGTTTGGGAAATGAAGCAAAGCACGCTGATCGGCATGGCTG 9148 |||||| ||||| |||||||| ||||| || || || | || | || | |||||| | Sbjct 51900 TAAAGAATCTGTACAAAACCGTATGGGAGATCAAACAGAAGGCGATAATTGACATGGCAG 51959 Query 9149 CGGATAGAGGCGCTTTTATTGATCAGAGTCAATCTTTTAACGTGTTCGTAGCCGCACCAA 9208 | ||| | ||||| || ||||| ||| |||||| | ||| | | | | | || | Sbjct 51960 CCGATCGCGGCGCCTTCATTGACCAGTCTCAATCGCTGAACATTTACATGGAACAGCCTA 52019 Query 9209 CTTACGCTTTGATGTCCAGCATTCATTATTTAACTTGGAAAATGGGTTTAAAAACAGGCA 9268 | || || | |||| || || || | || ||||| | || ||||||| || Sbjct 52020 CATATGCCAAGTTGTCTAGTATGCACTTTTATGGCTGGAAGAAAGGACTAAAAACTGGAG 52079 Query 9269 TGTACTATTTGCGCACAAAACCCGCCGCTGAACCTATCAAATTTACAGT 9317 | || ||||||||||| ||||||| || || | ||||| |||||||| Sbjct 52080 TATATTATTTGCGCACCCAACCCGCTGCCGATGCCATCAAGTTTACAGT 52128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397881966640