Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq45 138 1e-27 seq73 98.7 8e-16 >seq45 Length=276350 Score = 138 bits (152), Expect = 1e-27 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| || | ||| |||||||| || ||||| |||||||||||||||||||| | Sbjct 45781 CCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGAC 45840 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| ||||||| || || ||||| || |||| || || |||||||| || || Sbjct 45841 AGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGA 45900 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| ||||| ||||| || | |||| | ||| || ||| || ||| Sbjct 45901 ATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACT 45960 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAG 27249 || | || || | ||| ||||| || ||||||||||| |||||||||| Sbjct 45961 TCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCATAG 46009 >seq73 Length=143992 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 130405 GTTTTCGACGGTGAATTGAATGGCATTGGTGGCCGGCTTGGTGCGCAAATAATACATGCC 130464 ||| || || || || | ||||||| || || || | ||||||||||||||| | || Sbjct 52135 GTTATCTACTGTAAACTTGATGGCATCGGCAGCGGGTTGGGTGCGCAAATAATATACTCC 52076 Query 130465 TGTTTTGAGTCCAATTTTGTGTCCATAATTGTGGATGCTGCACATTGTTTGG--TAATTG 130522 ||||| ||||| | || |||||| ||| || || ||| |||| || | Sbjct 52075 AGTTTTTAGTCCTTTCTTCCAGCCATAAAAGTGCATACTAGACA--ACTTGGCATATGTA 52018 Query 130523 GGTTGCGCCACGAATATGTTGAGCGATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCA 130582 || || ||| | | ||||| |||||||| || || ||||| || ||||| | || || Sbjct 52017 GGCTGTTCCATGTAAATGTTCAGCGATTGAGACTGGTCAATGAAGGCGCCGCGATCGGCT 51958 Query 130583 GCCATGTCGAGCATGGTTTTATTTTTCATCTCCCAAGCGGTCTTGTATAGAT 130634 |||||||| | || | || | ||| |||||||| |||| ||||| |||| Sbjct 51957 GCCATGTCAATTATCGCCTTCTGTTTGATCTCCCATACGGTTTTGTACAGAT 51906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933975331184