Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq73 118 1e-21 >seq73 Length=143992 Score = 118 bits (130), Expect = 1e-21 Identities = 322/487 (66%), Gaps = 7/487 (1%) Strand=Plus/Minus Query 111557 TCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGA 111616 ||||||| ||||||||||||||||| ||||||| | | || | || ||| || Sbjct 50803 TCAACCCTTTTCATGAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTT 50744 Query 111617 GCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCAT 111676 | ||| || ||| ||||| ||||| || ||||| || | ||||| || |||||| Sbjct 50743 GACTCCTCTGAACCATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCAT 50684 Query 111677 GGCTCAAGATAGACTGCGATAGATCCCTTTC---GACGCCCAGCTTGATTTACATAGCGC 111733 ||||| || |||| || | || || |||| | ||| | |||| ||||| || Sbjct 50683 GGCTCTAGGTAGATGGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGA 50624 Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793 || || | || |||| | ||||| || ||||| |||| || || |||||||| || Sbjct 50623 GCAGTATCATTGAATATTCTGAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCG 50564 Query 111794 CGAATACGAGATTTATTGGCTCTCACATCATGGATGTGC-ATCCCAATACCCCCAGCCCA 111852 ||||| || | ||| | | | || || ||| | || || || || || Sbjct 50563 CGAATGTATGAACTGGAGGCACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGT 50505 Query 111853 CTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTT 111912 ||| || | ||||| | ||||| || || | ||||| || || || ||||| Sbjct 50504 CTTACTAATGAGTGCACATTGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTT 50445 Query 111913 GTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGT 111972 | | | ||||||||| || ||||| || || | || |||| |||||||| || Sbjct 50444 AATATCAAGAAGGAAGCAGCTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGT 50385 Query 111973 TGGTGTTGCGTGAATGAA-CATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGAAT 112031 || || ||||| || || || ||| |||||| | | ||| ||||||| | || || Sbjct 50384 GGGAGTGGCGTGGATAAATAATTTCTT-GGACATGTAATTGTAAGTCTCCATGGCACGAT 50326 Query 112032 CAATGTC 112038 |||| || Sbjct 50325 CAATATC 50319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031356267200