Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650065.1_202016-05-23] 82 sequences; 6,346,114 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq73 194 2e-44 >seq73 Length=143992 Score = 194 bits (214), Expect = 2e-44 Identities = 685/1057 (65%), Gaps = 16/1057 (2%) Strand=Plus/Minus Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAA 76078 ||||||||||| ||||| | ||| | || | || || || ||||||||||| Sbjct 51385 TAAATTGTTTCAAAAATTCTGACATTCAATTCACGGGCCTCCTGAGATTCAAAAGGATAG 51326 Query 76079 TGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTC 76138 | | ||| || || | ||| |||| |||||||||||| | ||| || || ||||||||| Sbjct 51325 CGCATAAGCATGAAAGTATCAGCTAATCCCTGAACTCCTACACCTATTGGCCTATGTCTC 51266 Query 76139 TTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGA 76198 || || ||| |||||| || |||| |||||||||||| ||||||||| |||| | | Sbjct 51265 TTGTTAGAATATTCAGCCTCAGGAACAGGGTAATAATTCTCGTCTATAATTCTATTCAAA 51206 Query 76199 TTTCTGACAACTA-CTT-TAACCACGTCCT--TTAGTTTGAG--AAAATC-AAATTTTCC 76251 || || || ||| || || | | | || || ||| || | | ||| Sbjct 51205 TTGAAAGTAAGTATCTTGCAAGCAGAATGTAATAACTTAAAGTCAAATTCGAGAGTTTTA 51146 Query 76252 ATCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGC 76311 | | | ||| || | | |||| || || || ||||| || || || ||||||| Sbjct 51145 GTGT-TTACATACTTTGGCAATGCTAGTGAAGCGAGGTTACACACTGCAACTTCATTAGG 51087 Query 76312 ATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTG 76371 | | |||||| | ||||| ||||| || ||| |||| ||||| || | || | Sbjct 51086 AGATGTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTT 51027 Query 76372 TTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431 || || ||| | ||||| | |||||| || | | | |||||||| |||||||| Sbjct 51026 CTGATTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAAT 50967 Query 76432 CTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT 76491 || |||| | |||| ||| | | | || | | | |||| | | | Sbjct 50966 TTGCGATTGTAAGATAGCAAACCAAAGGGTTTGCGCGGGAACT---GTTTTGCGACCCAT 50910 Query 76492 --CTCTC-TTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAA 76548 || || ||||| || ||||| ||||||||| ||||||||||| | ||| | Sbjct 50909 GCCTTTCGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAG 50850 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCAT 76608 || ||| |||| || |||||||| | ||| | ||| | | ||||| |||||| Sbjct 50849 TCCTCTACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCAT 50790 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 || || || || ||||| | ||| || | || | | || || || || Sbjct 50789 GAAAAGGTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACC 50730 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 || ||| ||||||||||| || | |||||||| ||||||||| ||||| || || Sbjct 50729 ATGGTTTTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGAT 50670 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | ||| || ||| ||||||||||| | ||| | ||||| | ||| | Sbjct 50669 GGCAAATGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAA 50610 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 | ||| | ||| || ||||| || || || |||||||| || ||| || | Sbjct 50609 TATTCTGAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACT 50550 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | ||||| || || || | || ||||| |||||||| | ||| || || || Sbjct 50549 GGAGGCACGTATTTTGTGTATTGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGC 50490 Query 76909 ACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAA 76968 ||| | | | |||||| | || || ||| ||||||| | || | |||||| || Sbjct 50489 ACATTGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAA 50430 Query 76969 ACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGT 77028 ||||||||||||||| || |||||| | || || | ||| |||| || || | Sbjct 50429 GCAGCTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGAT 50370 Query 77029 GAACCATTTTTCAGA-AAGTAGATTGTATGTTTCAAT 77064 || |||| | || | ||| |||||| || || || Sbjct 50369 AAATAATTTCTTGGACATGTA-ATTGTAAGTCTCCAT 50334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933669242240