Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq236 132 5e-26 seq231 132 5e-26 seq180 132 5e-26 seq237 111 2e-19 seq183 96.9 4e-15 >seq236 Length=138068 Score = 132 bits (146), Expect = 5e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 117039 GCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATAT 117098 ||| |||||||| | |||| || || || | || |||||||| || ||| |||||||| Sbjct 115510 GCCAGGTGGCCTACACGGCAGTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCATAT 115451 Query 117099 TTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCA 117158 ||||||| || |||||||| ||||||||||| || || || |||||| || ||||||| Sbjct 115450 TTTGGCTGAAAAAACGCGGGCTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCA 115391 Query 117159 GGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 ||||||||||||| || ||| |||| |||| Sbjct 115390 GGGACGAGGGTCTACACGCCGAGTTTGGATGTT 115358 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 ||||||||||| |||| || || ||||| || || ||||| ||| || || ||| | Sbjct 115958 TACAAAAAGGCTCAGGCTTCATTTTGGACAGTTGAAGAGGTTGACTTGGGCACCGACTCT 115899 Query 116708 AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||||| | | |||| ||| |||||| || || || ||||| ||| ||||||| Sbjct 115898 CGCGACTGGTTGGGTTTGACTGACGGCGAGCGGCACTTTATAAAGCATGTGTTGGCCTTC 115839 Query 116768 TTCGCCGCCAG 116778 || || ||||| Sbjct 115838 TTTGCGGCCAG 115828 >seq231 Length=443877 Score = 132 bits (146), Expect = 5e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 117039 GCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATAT 117098 ||| |||||||| | |||| || || || | || |||||||| || ||| |||||||| Sbjct 402243 GCCAGGTGGCCTACACGGCAGTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCATAT 402302 Query 117099 TTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCA 117158 ||||||| || |||||||| ||||||||||| || || || |||||| || ||||||| Sbjct 402303 TTTGGCTGAAAAAACGCGGGCTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCA 402362 Query 117159 GGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 ||||||||||||| || ||| |||| |||| Sbjct 402363 GGGACGAGGGTCTACACGCCGAGTTTGGATGTT 402395 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 ||||||||||| |||| || || ||||| || || ||||| ||| || || ||| | Sbjct 401795 TACAAAAAGGCTCAGGCTTCATTTTGGACAGTTGAAGAGGTTGACTTGGGCACCGACTCT 401854 Query 116708 AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||||| | | |||| ||| |||||| || || || ||||| ||| ||||||| Sbjct 401855 CGCGACTGGTTGGGTTTGACTGACGGCGAGCGGCACTTTATAAAGCATGTGTTGGCCTTC 401914 Query 116768 TTCGCCGCCAG 116778 || || ||||| Sbjct 401915 TTTGCGGCCAG 401925 >seq180 Length=127670 Score = 132 bits (146), Expect = 5e-26 Identities = 121/153 (79%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 117039 GCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATAT 117098 ||| |||||||| | |||| || || || | || |||||||| || ||| |||||||| Sbjct 22559 GCCAGGTGGCCTACACGGCAGTGGAAGGAATTTTATTTTCGGGTAGCTTCTGCGCCATAT 22618 Query 117099 TTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCA 117158 ||||||| || |||||||| ||||||||||| || || || |||||| || ||||||| Sbjct 22619 TTTGGCTGAAAAAACGCGGGCTCATGCCCGGGCTAACCTTTTCCAACGAACTAATCTCCA 22678 Query 117159 GGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 ||||||||||||| || ||| |||| |||| Sbjct 22679 GGGACGAGGGTCTACACGCCGAGTTTGGATGTT 22711 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 ||||||||||| |||| || || ||||| || || ||||| ||| || || ||| | Sbjct 22111 TACAAAAAGGCTCAGGCTTCATTTTGGACAGTTGAAGAGGTTGACTTGGGCACCGACTCT 22170 Query 116708 AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 |||||||| | | |||| ||| |||||| || || || ||||| ||| ||||||| Sbjct 22171 CGCGACTGGTTGGGTTTGACTGACGGCGAGCGGCACTTTATAAAGCATGTGTTGGCCTTC 22230 Query 116768 TTCGCCGCCAG 116778 || || ||||| Sbjct 22231 TTTGCGGCCAG 22241 >seq237 Length=221212 Score = 111 bits (122), Expect = 2e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | Sbjct 75921 AAAAATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACC 75862 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | || | | ||| | |||| || |||| ||||| ||||| || ||| | || Sbjct 75861 TAGTGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGA 75802 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 || |||||||| || | || || ||||| |||| |||| || || || || || Sbjct 75801 TCAACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTA 75742 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||| || ||||| | ||||| || ||||||| Sbjct 75741 TAACATACAAAAGGAATCGACGCTTCACTTAGTGTT 75706 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 74094 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74035 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 74034 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 73975 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 73974 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 73915 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 73914 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 73882 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 74322 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74263 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 74262 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74203 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 74202 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74143 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 74142 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 74110 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 74550 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74491 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 74490 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74431 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 74430 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74371 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 74370 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 74338 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 74778 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74719 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 74718 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74659 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 74658 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74599 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 74598 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 74566 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 75006 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74947 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 74946 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74887 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 74886 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74827 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 74826 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 74794 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 75234 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75175 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 75174 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75115 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 75114 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75055 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 75054 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 75022 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 75462 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75403 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 75402 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75343 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 75342 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75283 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 75282 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 75250 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| |||||||| || ||||| |||||||| ||| | || || ||| | | Sbjct 75690 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75631 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | ||| | |||| || |||| ||||| ||||| || ||| | || || Sbjct 75630 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75571 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||||| || | || || ||||| |||| |||| || || || || || || Sbjct 75570 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75511 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||| || ||||| | ||||| || ||||||| Sbjct 75510 CATACAAAAGGAATCGACGCTTCACTTAGTGTT 75478 >seq183 Length=66479 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || ||||| |||||||| ||||||||||| | || || || ||| Sbjct 26811 ATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCCAGT 26752 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | ||| | |||| || |||| || || ||||| || || | || || Sbjct 26751 GATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGATCAA 26692 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||||| || | || || || || || || |||| ||||| || |||||||| Sbjct 26691 CAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTACAAT 26632 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || || || ||| | || ||||| | |||||| Sbjct 26631 ATTCAAAAAGAGTCTACTTTGCATTTGGTGTTG 26599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217589940000