Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq237 156 6e-33 seq183 136 6e-27 >seq237 Length=221212 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 74322 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74263 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 74262 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74203 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 74202 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74143 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 74142 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74083 Query 124777 CATAAAAA 124784 |||||| Sbjct 74082 TGTAAAAA 74075 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 74550 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74491 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 74490 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74431 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 74430 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74371 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 74370 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74311 Query 124777 CATAAAAA 124784 |||||| Sbjct 74310 TGTAAAAA 74303 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 74778 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74719 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 74718 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74659 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 74658 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74599 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 74598 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74539 Query 124777 CATAAAAA 124784 |||||| Sbjct 74538 TGTAAAAA 74531 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 75006 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74947 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 74946 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 74887 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 74886 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 74827 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 74826 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74767 Query 124777 CATAAAAA 124784 |||||| Sbjct 74766 TGTAAAAA 74759 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 75234 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75175 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 75174 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75115 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 75114 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75055 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 75054 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 74995 Query 124777 CATAAAAA 124784 |||||| Sbjct 74994 TGTAAAAA 74987 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 75462 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75403 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 75402 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75343 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 75342 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75283 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 75282 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75223 Query 124777 CATAAAAA 124784 |||||| Sbjct 75222 TGTAAAAA 75215 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 75690 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75631 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 75630 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75571 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 75570 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75511 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 75510 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75451 Query 124777 CATAAAAA 124784 |||||| Sbjct 75450 TGTAAAAA 75443 Score = 156 bits (172), Expect = 6e-33 Identities = 184/248 (74%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 75918 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 75859 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 75858 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 75799 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 75798 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 75739 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776 || ||||| ||||| || | || || || ||| | | ||||||| || ||| ||| Sbjct 75738 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGGAATGCAAATATT 75679 Query 124777 CATAAAAA 124784 |||||| Sbjct 75678 TGTAAAAA 75671 Score = 150 bits (166), Expect = 3e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||||||| |||| ||||| || || ||||| ||||| | ||| | ||| | | Sbjct 74094 AATGCAAATATTTGTAAAAACACTTACGGGTAAAACCATAACCCTTGAGGTGGAACCTAG 74035 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| |||| || |||||||| || || || || || || ||||| Sbjct 74034 TGATACTATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAGGGAATTCCCCCCGATCA 73975 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| ||||||||||| ||||| |||| ||| | ||||||||| Sbjct 73974 ACAACGACTAATTTTTGCTGGAAAACAATTGGAGGACGGTCGTACACTTTCAGATTATAA 73915 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || ||||| ||||| || | || || || ||| | | ||||||| Sbjct 73914 CATACAAAAGGAATCGACGCTTCACTTAGTGTTAAGGCTGAGAGGTGG 73867 >seq183 Length=66479 Score = 136 bits (150), Expect = 6e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || |||||||||||| | || ||||| || || ||||| || || | || | || | Sbjct 26814 ACTATGCAAATATTTGTGAAAACACTCACGGGTAAAACCATCACATTGGAAGTAGAGCCC 26755 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 | |||||| || ||| | || || ||||| ||||| || || || ||||||||| Sbjct 26754 AGTGATACTATCGAAAATGTTAAGGCTAAGATTCAGGATAAGGAGGGAATTCCACCTGAT 26695 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 |||||| | || |||||||| || || ||| |||| || | || || | ||| || Sbjct 26694 CAACAACGACTGATTTTTGCTGGTAAGCAACTAGAAGACGGCCGCACTCTGTCAGACTAC 26635 Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 |||||||||||||| || |||||||||||||| || | ||||| ||||| Sbjct 26634 AATATTCAAAAAGAGTCTACTTTGCATTTGGTGTTGAGATTACGCGGTGG 26585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755453639200000