Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq237 116 6e-21 seq183 116 6e-21 >seq237 Length=221212 Score = 116 bits (128), Expect = 6e-21 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 75689 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 75748 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 75749 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75808 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 75809 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75868 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 | || || || || |||||||| || | |||||| | |||||||||||||| Sbjct 75869 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTT 75920 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 74093 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 74152 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 74153 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74212 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 74213 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74272 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 74273 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 74322 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 74321 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 74380 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 74381 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74440 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 74441 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74500 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 74501 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 74550 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 74549 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 74608 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 74609 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74668 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 74669 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74728 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 74729 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 74778 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 74777 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 74836 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 74837 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74896 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 74897 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74956 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 74957 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 75006 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 75005 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 75064 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 75065 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75124 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 75125 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75184 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 75185 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 75234 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 75233 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 75292 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 75293 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75352 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 75353 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75412 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 75413 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 75462 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||||||||| || ||||| || || || | || ||||| || ||| |||||||||| Sbjct 75461 TTCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTG 75520 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||| || | | || || |||||||||||||||||||| | || ||| ||||| || | Sbjct 75521 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75580 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 ||||||| || || ||||| |||||| | ||| | Sbjct 75581 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75640 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 | || || || || |||||||| || | |||||| | |||||||||||| Sbjct 75641 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 75690 Score = 111 bits (122), Expect = 2e-19 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 ||||||||| || ||||| || || || | || ||||| || ||| ||||||||||| Sbjct 73866 TCCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGA 73925 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || | | || || |||||||||||||||||||| | || ||| ||||| || || Sbjct 73926 AAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGG 73985 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 |||||| || || ||||| |||||| | ||| || Sbjct 73986 AATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCAC 74045 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 || || || || |||||||| || | |||||| | |||||||||||| Sbjct 74046 CTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATT 74094 >seq183 Length=66479 Score = 116 bits (128), Expect = 6e-21 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 146050 TCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGA 146109 |||||| | | ||| || |||||||| |||||||| ||||| ||||| || ||||| Sbjct 26584 TCCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGA 26643 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||||| | || || |||| ||| || ||||||||||||| || ||| ||||| || || Sbjct 26644 CAGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGG 26703 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTAT--CTGAACTTTCT 146227 |||||| || ||||| || ||||| ||| | ||| Sbjct 26704 AATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGC--TCT 26761 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | |||||| |||||||| || | |||||| | ||||||||||| Sbjct 26762 ACTTCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCAT 26811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743524076480000