Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq241 143 4e-30 >seq241 Length=536494 Score = 143 bits (158), Expect = 4e-30 Identities = 194/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||| | ||||||| | | || || |||||||||||||| |||||||||||||| || Sbjct 44802 GCCAAGAGACATCGCA-AGGTGTTGCGTGATAACATCCAAGGCATCACCAAGCCAGCCAT 44744 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||||| | ||||| ||||||||| ||||||| | | || |||||| | Sbjct 44743 CAGAAGATTGGCTCGCAGAGGTGGTGTCAAGCGTATCTCTGGGCTAATATACGAAGAGGT 44684 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | ||| | ||| | | | ||| ||| | || || || |||||||| Sbjct 44683 GCGCGGCGTTCTCAAGGTTTTCTTGGAAAACGTCATCAAGGACTCTGTCACATATACCGA 44624 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | |||||||| ||||| ||||||||||||| || || | || | ||||| Sbjct 44623 GCACGCCAGGCGTAAGACAGTCACTGCCATGGATATCGTGTACTCACTAAAGAGGCAAGG 44564 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | || ||||| ||| ||||| Sbjct 44563 TAGAACCCTCTACGGTTTCGGAGGTTAA 44536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074971423250