Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq241 271 2e-67 >seq241 Length=536494 Score = 271 bits (300), Expect = 2e-67 Identities = 596/889 (67%), Gaps = 8/889 (1%) Strand=Plus/Plus Query 363414 ATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 ||||||||||| ||| | ||||| | |||| |||| | || |||||| | | | | Sbjct 149296 ATCCTACCTATTACGTGTAAATGGGAAGATTGCTGAAAGGCCTCAGCATCTTCTCGTCAG 149355 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCT 363533 |||||| ||||| || | | ||| ||||| || || || || || || || Sbjct 149356 AGTTGCTTGCGGTATACACTCCAATGATATTGATCGTGCCATGGAGACTTACAA--TTAC 149413 Query 363534 AAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || | | |||| | |||||||| || ||| | | ||| |||||||| | Sbjct 149414 ATGTCCAAGAAATTATTTATCCACGCCACTCCCACACTCTTCAACTCTGGAACTAAATTT 149473 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || || |||||| ||||| ||||| | || ||||| ||||| || ||||| ||| Sbjct 149474 CCTCAAATGTCTAGCTGCTTCCTTCTTGATATTAAGGATGATTCTATTTCTGGTATTTTT 149533 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 ||||| |||| | ||||| || ||| |||| ||||| || || ||| || | || Sbjct 149534 GACACCCTTACCCAATGTGCACTCATTAGTAAGACAGCAGGAGGGATAGGTTTAGCAATA 149593 Query 363712 CACAATGTTCGTGCA--CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGC 363769 ||||| | ||||| ||| || ||||||||||||||| || | || |||||| Sbjct 149594 CACAAAATACGTGCCTCCAGTTCA--TACATTCGCGGCACAAATGGGCATTCCAATGGGA 149651 Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAA 363829 | | || ||||| | | || | ||||||| | || || || ||||| || |||| Sbjct 149652 TTATACCTATGCTCAGAATATTCAATGATACTGCTCGTTATGTTGATCAGGGAGGGGGAA 149711 Query 363830 AGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTC 363889 | | ||||| | ||||| || || || ||||| ||||| ||||||||||| || | Sbjct 149712 AAAGAAAAGGTTCATTTGCCATCTACCTAGAGCCATGGCATGCTGATATTTTTGAATTCC 149771 Query 363890 TTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCAC 363949 | || || || |||||| || |||||| | | || | || ||||||||||| Sbjct 149772 TAGATCTACGAAAAAACCATGGTTCAGAGGAGTCAAGGGCTAGGGACTTGTTCTATGCAT 149831 Query 363950 TTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTT 364009 | ||| | | |||| ||| ||||| | || || || | | || ||| | | | | Sbjct 149832 TGTGGATCCCAGACCTTTTCATGAAAAGGGTTGAAGCTAATGAAAACTGGACTTTGATGT 149891 Query 364010 GCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACG 364069 ||||| | || ||| ||| || | || ||||| || || | || ||||| Sbjct 149892 GCCCAGATGAGTGTAGAGGACTAGATCAGGTTTGGGGAGAGGAATTTGAAAAATTATACA 149951 Query 364070 AAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTG 364129 | ||||| ||| | || | || ||| || ||| ||||||| || | || ||||||| Sbjct 149952 CTAGTTATGAGTCGAAAGGCATGGGTCGCAAAACAGTTCCCGCGCAAACCCTTTGGTTTG 150011 Query 364130 CCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCA 364189 | ||| | | ||||| ||||| |||||||| || || ||||| ||||| || | || | Sbjct 150012 CTATCTTACAATCGCAAATTGAAACAGGAACTCCTTACATGTTATACAAGGACGCTTGTA 150071 Query 364190 ACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGA 364249 | |||||| || ||| || || | ||||| ||| || |||||| |||| ||||| Sbjct 150072 ATTACAAGTCAAATCAGAAGAACATAGGTACTATTAAGTCTAGCAACTTATGCTGCGAGA 150131 Query 364250 TTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTC 364298 || | |||| || |||| | || ||| || |||||||| || || Sbjct 150132 TTGTGCAATATACATCTCCTAATGAAGTTGCAGTGTGTAACCTCGCTTC 150180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303349425195500