Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq183 156 8e-33 seq237 145 1e-29 >seq183 Length=66479 Score = 156 bits (172), Expect = 8e-33 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| | ||| ||||| | | ||| ||||| || | || ||||||||||| || || || Sbjct 26578 TTAGTCTCCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTA 26637 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || || || || | || ||||||| ||||| || || || || |||| |||||| || Sbjct 26638 GTCTGACAGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATC 26697 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 |||||||| || ||||| || |||||||| ||||| || ||||| || || | Sbjct 26698 AGGTGGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGG 26757 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||||||||| ||||||||||| |||||||| || || || ||||| ||||| Sbjct 26758 CTCTACTTCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCAT 26811 >seq237 Length=221212 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 73882 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 73941 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 73942 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 74001 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 74002 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 74061 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 74062 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 74094 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 74110 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 74169 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 74170 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 74229 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 74230 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 74289 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 74290 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 74322 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 74338 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 74397 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 74398 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 74457 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 74458 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 74517 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 74518 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 74550 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 74566 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 74625 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 74626 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 74685 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 74686 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 74745 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 74746 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 74778 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 74794 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 74853 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 74854 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 74913 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 74914 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 74973 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 74974 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 75006 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 75022 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 75081 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 75082 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 75141 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 75142 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 75201 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 75202 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 75234 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 75250 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 75309 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 75310 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 75369 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 75370 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 75429 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 75430 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 75462 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 75478 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 75537 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 75538 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 75597 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 75598 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 75657 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 75658 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 75690 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68250 AATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCT 68309 || || ||||| ||||| || || ||||| ||||||||||| || ||||| | || || Sbjct 75706 AACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGACCGTCC 75765 Query 68310 TCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCT 68369 || || || || || || || || |||| |||||| ||||| ||||| || ||||||||| Sbjct 75766 TCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCCTTGTCT 75825 Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| ||||| || || || || || | ||| || || | ||| |||||| Sbjct 75826 TGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTTATGGTT 75885 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || ||||| || || || || ||||| |||||| Sbjct 75886 TTACCCGTAAGTGTTTTTACAAATATTTGCATT 75918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619519930000