Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq183 104 2e-17 seq237 100 2e-16 >seq183 Length=66479 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || || |||| |||||| || ||||| | ||||| ||||||||||| ||||| || | Sbjct 26585 CCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGTCTGAC 26644 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || ||||| ||||| |||||||| | || || || ||||| || || ||| Sbjct 26645 AGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAGGTGGA 26704 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || || || |||||| || | | ||| | || || ||| || || Sbjct 26705 ATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCTCTACT 26764 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | ||||| || || || ||||| ||||| || ||||| Sbjct 26765 TCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCAT 26811 >seq237 Length=221212 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 73876 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 73935 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 73936 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 73995 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 73996 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 74055 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 74056 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74093 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 74104 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 74163 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 74164 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 74223 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 74224 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 74283 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 74284 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74321 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 74332 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 74391 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 74392 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 74451 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 74452 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 74511 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 74512 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74549 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 74560 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 74619 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 74620 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 74679 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 74680 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 74739 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 74740 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74777 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 74788 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 74847 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 74848 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 74907 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 74908 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 74967 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 74968 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75005 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 75016 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 75075 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 75076 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 75135 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 75136 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 75195 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 75196 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75233 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 75244 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 75303 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 75304 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 75363 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 75364 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 75423 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 75424 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75461 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 75472 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 75531 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 75532 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 75591 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 75592 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 75651 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 75652 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75689 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGA 114224 || || || ||||| || | ||| ||||| ||||| ||||| ||||| | |||||| Sbjct 75700 AGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAATCTGAAAGTGTACGA 75759 Query 114225 GAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCT 114284 || || | |||||| ||||| | || || || ||||| || || ||||| || || Sbjct 75760 CCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGGGAATTCCCTCC 75819 Query 114285 TTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTC 114344 ||||| |||||| |||| | ||||| || || | | ||| || || | ||| Sbjct 75820 TTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCACCTCAAGGGTT 75879 Query 114345 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | ||||| || || || ||||||||||| || ||||| Sbjct 75880 ATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420133119903000