Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq237 158 9e-34 seq183 138 8e-28 >seq237 Length=221212 Score = 158 bits (174), Expect = 9e-34 Identities = 176/233 (76%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 75691 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 75748 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 75749 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75808 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 75809 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75868 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTT 15180 | || | ||| ||||||||||| || || ||||||||||| |||||||| ||| Sbjct 75869 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCATTTTT 75921 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 73867 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 73924 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 73925 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 73984 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 73985 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74044 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 74045 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74093 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 74095 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 74152 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 74153 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74212 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 74213 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74272 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 74273 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74321 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 74323 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 74380 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 74381 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74440 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 74441 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74500 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 74501 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74549 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 74551 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 74608 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 74609 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74668 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 74669 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74728 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 74729 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 74777 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 74779 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 74836 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 74837 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 74896 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 74897 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 74956 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 74957 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75005 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 75007 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 75064 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 75065 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75124 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 75125 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75184 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 75185 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75233 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 75235 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 75292 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 75293 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75352 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 75353 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75412 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 75413 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75461 Score = 156 bits (172), Expect = 3e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || ||||| ||||| ||||| || || || ||||||||||| |||| ||| Sbjct 75463 CCACCTCTCAGCCTTAACACTAAGTGAAGCGTCGATTCCTTTTGTATGTTATAAT--CTG 75520 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | | | || |||| || |||||||| ||||| | || | || ||||| ||| | Sbjct 75521 AAAGTGTACGACCGTCCTCCAATTGTTTTCCAGCAAAAATTAGTCGTTGTTGATCGGGGG 75580 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 ||||||| |||||||| ||| || |||||| |||| |||||||| ||| ||| | Sbjct 75581 GAATTCCCTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATAGTATCACTAGGTTCCA 75640 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | ||| ||||||||||| || || ||||||||||| |||||||| Sbjct 75641 CCTCAAGGGTTATGGTTTTACCCGTAAGTGTTTTTACAAATATTTGCAT 75689 >seq183 Length=66479 Score = 138 bits (152), Expect = 8e-28 Identities = 171/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 14945 GTCTGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAAT 15004 |||| ||||| || ||||| || || ||||| | ||||| |||||||| || ||||| | Sbjct 26581 GTCT-CCACCGCGTAATCTCAACACCAAATGCAAAGTAGACTCTTTTTGAATATTGTAGT 26639 Query 15005 CGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGT 15064 | ||| | | ||||||||| ||| || ||||| | |||| || ||||| || Sbjct 26640 CTGACAGAGTGCGGCCGTCTTCTAGTTGCTTACCAGCAAAAATCAGTCGTTGTTGATCAG 26699 Query 15065 TTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTT 15124 ||||||||| ||||| || ||| || || ||| |||| |||||||| || | Sbjct 26700 GTGGAATTCCCTCCTTATCCTGAATCTTAGCCTTAACATTTTCGATAGTATCACTGGGCT 26759 Query 15125 CTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || || || ||||||||||| || || ||||| ||||| ||||||||| Sbjct 26760 CTACTTCCAATGTGATGGTTTTACCCGTGAGTGTTTTCACAAATATTTGCATA 26812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357390911071250