Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq243 313 3e-80 seq109 215 7e-51 seq241 147 3e-30 >seq243 Length=542955 Score = 313 bits (346), Expect = 3e-80 Identities = 1074/1661 (65%), Gaps = 40/1661 (2%) Strand=Plus/Minus Query 6508 TTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC---CTTTTTCGCGTA 6564 ||||||| |||||| ||||| || || ||||||| | || || | | ||| | Sbjct 297680 TTTCATTGAATAACAATAGTTCTCAAGTTCATTCTTGGATTCAACACACCTCTTC---TT 297624 Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||||||||| || || || |||| || || || |||||| | |||||||||| | Sbjct 297623 CTTTTCATCATCTTCCCTAAACTTCTCTGCTTCAGCAACCATCCTATCAATGTCTTGCTG 297564 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||| ||||| || || || | | ||| | || || | | ||| || Sbjct 297563 TGAAAGTCTTCCCTTGTCATTTGTTATAGTTACATGTTCAGTCTTTCCTGTCGACTTGTC 297504 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| || |||| |||||||| ||||| | || || | || ||||| || || Sbjct 297503 GGCAGCAGACACTGTCAATATACCATTGGCATCGATGTCAAAGGTGACTTTAATCTGGGG 297444 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || || || | || || || || |||| ||| | || |||||| |||| || Sbjct 297443 AACTCCTCTTGGAGCAGGAGGTATGCCAGTCAAATGGAATTTGCCTAGTAAATTGTTGTC 297384 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| |||| | || | ||| | | ||| |||| || Sbjct 297383 ACATGTCATAGAACGTTCTCCTTCGAAGACCTGGATCATAACCCCCGTTTGGTTATTTTC 297324 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| || |||||| ||||| | || || || |||||||| || || | | Sbjct 297323 ATTGGTTGTAAATTCTTGTTCCTTCTTGGCGGGGATAGTAGTATTTCTGGGTATCAGCAC 297264 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || || || ||||| || ||||| || || || || | |||| Sbjct 297263 GGTCATAACACCGCCGGCGGTCTCAAGTCCTAGTGACAGTGGAGTGACATCTA---GTAA 297207 Query 6985 CAGG---TCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 ||| ||||| || ||||| ||| || ||||| || || || || || Sbjct 297206 CAGTAAATCTTGGACCTTGCTAGATTG------TTCGCCAGTTAAAATTGCAGCCTGAAC 297153 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||| || || || || || || || |||||||| | ||| ||||||| || || Sbjct 297152 AGCCGCGCCATAGGCTACTGCTTCGTCTGGGTTAATTGATTTGCAGGGTTCTTTGCCATT 297093 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 ||| | ||| | || ||| || || || ||||| || ||||| || || || | || Sbjct 297092 GAAAAAGTCCTTAATCAATTGCTGTATCTTAGGGATACGGGTCGAACCTCCTACAAGTAC 297033 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTT 7214 | ||||| | | | ||||| || | || || | ||| | ||||||||| || Sbjct 297032 CACTTCATGGATCTGCTTCTTATCCATATCTGCATCAGCTAAG-GCTTTTTCGACTGGGA 296974 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | || ||||| || ||| || ||||| || | || | || ||| Sbjct 296973 TTAAAGTGTTTTTGAACATTTCGGCACAGAGCTCCTCGAATCTGGCCCTAGTGATGTTGC 296914 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | | | || | ||| || ||| | || | |||| || | |||| | | Sbjct 296913 AACTGTAGTCGATGCCATCAAATATAGCTTCTACAACAATCGTGGCCTGTGTTGAGTGGG 296854 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 |||| || || || || || ||||| |||| | | ||| | ||||| || Sbjct 296853 ATAAGGTGCGTTTAGCACGTTCACATTGTGTTCTAAGTCTACGTAATGCACGTCTATTGG 296794 Query 7395 CGGAAATATCTTTCTT---ATGTTTACGTTTAAACTCTTCAGAG-AAGTGTCGAAGGAGT 7450 ||||||| ||| || || || ||||| || || | || || || | | Sbjct 296793 TTGAAATATTCTTCCCGCCATTCTTTCGCTTAAAGTCATCTACGCAAAAGTTGACCAA-T 296735 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || || ||||| |||||||| ||||| || || || || || ||||| Sbjct 296734 CTGTTGTCAAAGTCCTCACCGCCCAAGTGGGTATCACCTTGTGTGGCCTTTACCTCAAAA 296675 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || |||| || |||| | || ||||| || || ||||| |||| || ||||| Sbjct 296674 ATGCCATCTTCGATAGTTAAAATTGATACATCGAAAGTGCCACCGCCCAAATCGAAAATC 296615 Query 7571 AGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | || || | || | || | ||||| || | ||| || || || || || || || Sbjct 296614 AACACATTTTTTTCAGAAGTACCT-TTCTTGTCCATACCATAGGCAATTGCGGCAGCAGT 296556 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| |||||||| | | || | |||||||| || | || || || || || Sbjct 296555 TGGTTCATTGATAATACGCATAACATTTAACCCAGCAATGGTACCAGCGTCCTTAGTGGC 296496 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| ||||||||||| || || || || || | || || | | || | |||| Sbjct 296495 CTGTCGTTGAGAATCGTTAAAATAAGCGGGTACAGTGATAACAGCATTAGAGATTGTCTT 296436 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || | ||| ||||| || || || ||||| ||||| || ||||| || || || || || Sbjct 296435 TCCCAAATAAGATTCTGCAATTTCCTTCATCTTGGTGAGGACCATAGAAGATATTTCCTC 296376 Query 7810 AGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGC 7869 | || ||| |||||||| | ||| | || | |||| || ||||| | Sbjct 296375 TGGGTGGAAGGATTTAGTTTCACCCTGAAATTGTACCTTGATCACAGGCTTATCATTTGG 296316 Query 7870 ACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGG--TCCGAA 7927 || | ||| || | | ||| | ||| ||||| ||||| || || || Sbjct 296315 TCCAGCCGCAACAGTAAATGGCCAGTGTTTTATATCACTTTGGA--TGCAGGGATCATTG 296258 Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 | |||||| || || | | |||||||||||||||||||||| || || | || Sbjct 296257 ATCTTTCTCCCTATCAATCTTTTTGCATCAAAAACTGTGTTTTCAGGATTTCTAGCATCC 296198 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 || || || || ||||| || | | || || | || || || || || || || Sbjct 296197 TGATTTTTGGCGGCGTCGCCAACCAATCGCTCCACA---TCAGTGAAGGCAACATAAGAC 296141 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || || || || || ||||| || || || ||||||||||| || |||| ||| ||| Sbjct 296140 GGAGTTGTACGGTTGCCTTGATCATTGGCTATAATTTCTACAGTTTCATTTTTCCAAACG 296081 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || || || ||||| |||||||| || || || Sbjct 296080 CCAACACATGAGTAAGTGGTTCCCAAATCAATCCCAATAGC 296040 >seq109 Length=1716 Score = 215 bits (238), Expect = 7e-51 Identities = 794/1233 (64%), Gaps = 33/1233 (3%) Strand=Plus/Plus Query 6508 TTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC---CTTTTTCGCGTA 6564 ||||||| |||||| ||||| || || ||||||| | || || | | ||| | Sbjct 499 TTTCATTGAATAACAATAGTTCTCAAGTTCATTCTTGGATTCAACACACCTCTTC---TT 555 Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624 ||||||||| || || || |||| || || || |||||| | |||||||||| | Sbjct 556 CTTTTCATCATCTTCCCTAAACTTCTCTGCTTCAGCAACCATCCTATCAATGTCTTGCTG 615 Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684 || | ||| ||||| ||||| || || || | | ||| | || || | | ||| || Sbjct 616 TGAAAGTCTTCCCTTGTCATTTGTTATAGTTACATGTTCAGTCTTTCCTGTCGACTTGTC 675 Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744 ||||| || |||| |||||||| ||||| | || || | || ||||| || || Sbjct 676 GGCAGCAGACACTGTCAATATACCATTGGCATCGATGTCAAAGGTGACTTTAATCTGGGG 735 Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804 || || || || | || || || || |||| ||| | || |||||| |||| || Sbjct 736 AACTCCTCTTGGAGCAGGAGGTATGCCAGTCAAATGGAATTTGCCTAGTAAATTGTTGTC 795 Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTG 6864 | | | |||||| ||||| |||| | || | ||| | | ||| |||| || Sbjct 796 ACATGTCATAGAACGTTCTCCTTCGAAGACCTGGATCATAACCCCCGTTTGGTTATTTTC 855 Query 6865 TGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGG 6924 |||| || |||||| ||||| | || || || |||||||| || || | | Sbjct 856 ATTGGTTGTAAATTCTTGTTCCTTCTTGGCGGGGATAGTAGTATTTCTGGGTATCAGCAC 915 Query 6925 GGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAA 6984 |||||||| ||| || || || ||||| || ||||| || || || || | |||| Sbjct 916 GGTCATAACACCGCCGGCGGTCTCAAGTCCTAGTGACAGTGGAGTGACATCTA---GTAA 972 Query 6985 CAGG---TCTTGAAC------AGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGAC 7035 ||| ||||| || ||||| ||| || ||||| || || || || || Sbjct 973 CAGTAAATCTTGGACCTTGCTAGATTG------TTCGCCAGTTAAAATTGCAGCCTGAAC 1026 Query 7036 CGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTT 7095 | ||| || || || || || || || |||||||| | ||| ||||||| || || Sbjct 1027 AGCCGCGCCATAGGCTACTGCTTCGTCTGGGTTAATTGATTTGCAGGGTTCTTTGCCATT 1086 Query 7096 AAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAAC 7155 ||| | ||| | || ||| || || || ||||| || ||||| || || || | || Sbjct 1087 GAAAAAGTCCTTAATCAATTGCTGTATCTTAGGGATACGGGTCGAACCTCCTACAAGTAC 1146 Query 7156 GATTTCATTCACTTTCGATTTATCGATCTTTGAGTCT-CGAAGTGTTTTTTCGACAGGTT 7214 | ||||| | | | ||||| || | || || | ||| | ||||||||| || Sbjct 1147 CACTTCATGGATCTGCTTCTTATCCATATCTGCATCAGCTAAG-GCTTTTTCGACTGGGA 1205 Query 7215 CCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATG 7274 | | || ||||| || ||| || ||||| || | || | || ||| Sbjct 1206 TTAAAGTGTTTTTGAACATTTCGGCACAGAGCTCCTCGAATCTGGCCCTAGTGATGTTGC 1265 Query 7275 TATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAG 7334 | | | || | ||| || ||| | || | |||| || | |||| | | Sbjct 1266 AACTGTAGTCGATGCCATCAAATATAGCTTCTACAACAATCGTGGCCTGTGTTGAGTGGG 1325 Query 7335 ATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTAC 7394 |||| || || || || || ||||| |||| | | ||| | ||||| || Sbjct 1326 ATAAGGTGCGTTTAGCACGTTCACATTGTGTTCTAAGTCTACGTAATGCACGTCTATTGG 1385 Query 7395 CGGAAATATCTTTCTT---ATGTTTACGTTTAAACTCTTCAGAG-AAGTGTCGAAGGAGT 7450 ||||||| ||| || || || ||||| || || | || || || | | Sbjct 1386 TTGAAATATTCTTCCCGCCATTCTTTCGCTTAAAGTCATCTACGCAAAAGTTGACCAA-T 1444 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 || || || || ||||| |||||||| ||||| || || || || || ||||| Sbjct 1445 CTGTTGTCAAAGTCCTCACCGCCCAAGTGGGTATCACCTTGTGTGGCCTTTACCTCAAAA 1504 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || |||| || |||| | || ||||| || || ||||| |||| || ||||| Sbjct 1505 ATGCCATCTTCGATAGTTAAAATTGATACATCGAAAGTGCCACCGCCCAAATCGAAAATC 1564 Query 7571 AGTACGTTCGTATC-GTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 | || || | || | || | ||||| || | ||| || || || || || || || Sbjct 1565 AACACATTTTTTTCAGAAGTACCT-TTCTTGTCCATACCATAGGCAATTGCGGCAGCAGT 1623 Query 7630 TGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 ||||||||| |||||||| | | || | |||||||| || | || || || || || Sbjct 1624 TGGTTCATTGATAATACGCATAACATTTAACCCAGCAATGGTACCAGCGTCCTTAGTGGC 1683 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||||||| ||||||||||| || || || || Sbjct 1684 CTGTCGTTGAGAATCGTTAAAATAAGCGGGTAC 1716 >seq241 Length=536494 Score = 147 bits (162), Expect = 3e-30 Identities = 239/339 (71%), Gaps = 9/339 (3%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||||||||| || | ||| ||||| || | |||||| |||||||||| | ||| Sbjct 88361 ATCAAAATCTTCACCGCCGAGGTGAGTATCTCCTGATGTCGCTATGACTTCAAATACACC 88420 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 ||||| | | | ||||||||||| ||||||||||| || ||| | | | | Sbjct 88421 GTTGTCAATTGTAAGTAGGGAAACATCAAAAGTACCACCACCGAGATCATAGACCAAAAT 88480 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || || || || || ||||| || || ||||| || || || ||||| Sbjct 88481 ATTTTTTTCTTCATC---CTTATTGTCAAGACCATAAGCAATAGCAGCGGCTGTGGGTTC 88537 Query 7636 ATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTTG 7692 ||| | ||||| || ||| |||| |||||||| ||| | |||||||| || ||||| Sbjct 88538 ATTGAGTATACGTAATACA-TTCAAACCAGCAAT--TTGACCTGCATCTTTGGTAGCTTG 88594 Query 7693 TCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACC 7752 || || | ||| ||||| || || || || || || || || | | ||| ||| ||| Sbjct 88595 GCGCTGGGCATCATTAAAATATGCAGGAACTGTCACAACGGCATTTTTAACTGTCTGACC 88654 Query 7753 GAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791 |||| | ||| || || |||||||||| ||| || Sbjct 88655 GAGAAAGTTTTCGGCCATGCTCTTCATTTTGGAAAGCAC 88693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635130815210000