Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq249 95.1 2e-14 >seq249 Length=435716 Score = 95.1 bits (104), Expect = 2e-14 Identities = 282/427 (66%), Gaps = 16/427 (4%) Strand=Plus/Plus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 || || ||||| | ||||| || |||| || ||||| | ||||| | | ||| Sbjct 312810 TCTAGTATATCTGCACGATTAGTACCGGCCATCACAACTACACCTGATGATGATTTAAAG 312869 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCG-----CTG 16032 |||||||| ||| ||||| || || | || | ||||| |||||| || | | | Sbjct 312870 CCATCCATTTCTACCAAAATTTGATTTAATGTATTTTCCCTTTCATCGTTAGAACCACCG 312929 Query 16033 GCATA-CCACCAG-CACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGAT 16090 ||| | || || | || | || ||| || | |||||| || |||||||| |||| || Sbjct 312930 GCAAAGCCTCCTCTCGCT-CTTTTCTTACCAATGGCATCTATTTCATCAATAAAGATTAT 312988 Query 16091 GCATGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACC 16150 | || ||||| | ||| ||||| ||||||| |||||| ||| ||| | ||| Sbjct 312989 TGAAGGGGCATTTTTTCTAGCATTCTCAAATAGATCCCTTACACGACTGGGGCCGATACC 313048 Query 16151 AACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCAC 16209 ||| || | ||| | || | || | || || | | ||| || || | | ||| | Sbjct 313049 AACGAATACCTCAATGAAATCTGATCCAGAT-ATGGAGTAGAATGGAACTTGGGCTTCCC 313107 Query 16210 CCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCAC 16269 | |||| || ||| ||||| || ||||||||||| || || || || || | Sbjct 313108 CGGCAACAGCCTTGGCAAGAAGCGTTTTACCCGTACCAGGAGGTCCACAAAGCAGTGCGC 313167 Query 16270 CTCGTGGAATCTTGGCGCC---ACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCA 16326 || ||| || |||||||| |||| || |||| || || | || |||||||| | Sbjct 313168 CTTTTGGTATTTTGGCGCCCAAACTTTTAA---ATCTTTCTGGATTTTTGAGAAAATCTA 313224 Query 16327 CAATCTC 16333 ||| ||| Sbjct 313225 CAAACTC 313231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740460180000