Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Babesia_20microti_20[genbank_20GCA_5F001650075.1_202016-05-23] 250 sequences; 6,800,559 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq241 174 2e-38 >seq241 Length=536494 Score = 174 bits (192), Expect = 2e-38 Identities = 475/719 (66%), Gaps = 9/719 (1%) Strand=Plus/Minus Query 110329 GTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGA 110388 || |||| || ||| || || |||||| | |||||| ||| | |||||||||| Sbjct 150144 GTATATTGCACAATCTCGCAGCATAAGTTGCTAGACTTAATAGTACCTATGTTCTTCTGA 150085 Query 110389 TTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGT 110448 || || ||| | || || || ||||| || | |||||| || || || ||||| | || Sbjct 150084 TTTGACTTGTAATTACAAGCGTCCTTGTATAACATGTAAGGAGTTCCTGTTTCAATTTGC 150025 Query 110449 GACTTGAGAATGGCCTTCCATACA-TCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTC 110507 || | | || || ||| | | ||| |||| || ||| | | | | |||| Sbjct 150024 GATTGTAAGATAGCAAACCAAAGGGTTTGCG-CGGGAACTGTTTTGCGACCCATGCCTTT 149966 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||| || | ||||| || | |||||||||| ||| | || | | || || | Sbjct 149965 CGACTCATAACTAGTGTATAATTTTTCAAATTCCTCTCCCCAAACCTGATCTAGTCCTCT 149906 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAG 110627 || || || || | | | ||| ||| || | |||||||| |||||||| || Sbjct 149905 ACACTCATCTGGGCACATCAAAGTCCAGTTTTCATTAGCTTCAACCCTTTTCATGAAAAG 149846 Query 110628 GTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTT 110687 ||| || ||||||| || |||| | ||| | | | ||| || ||| ||||| Sbjct 149845 GTCTGGGATCCACAATGCATAGAACAAGTCCCTAGCCCTTGACTCCTCTGAACCATGGTT 149786 Query 110688 GAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGAT 110747 ||||| || | || || | ||||| | |||||||| || || |||| || | Sbjct 149785 TTTTCGTAGATCTAGGAATTCAAAAATATCAGCATGCCATGGCTCTAGGTAGATGGCAAA 149726 Query 110748 GGATCCCTTACGACGACCCGC---CTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCT 110804 || || || | ||| | ||| | |||||| || || || ||||||| | || Sbjct 149725 TGAACCTTTTCTTTTTCCCCCTCCCTGATCAACATAACGAGCAGTATCATTGAATATTCT 149666 Query 110805 GAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGG 110863 ||||||||| ||||| |||| ||| || |||||||| || | ||| | || ||| || Sbjct 149665 GAGCATAGGTATAATCCCATTGGAATGCCCATTTGTGCCGCGAATGTATGAACTGGA-GG 149607 Query 110864 CACGAATGTCGTGGATATGC-ATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC 110922 |||| || | ||| || ||| | ||| || || || || ||||||||| ||||||| Sbjct 149606 CACGTATTTTGTGTAT-TGCTAAACCTATCCCTCCTGCTGTCTTACTAATGAGTGCACAT 149548 Query 110923 TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAA 110982 | || || || || |||||||| ||| ||||| |||| | ||| || ||||| Sbjct 149547 TGGGTAAGGGTGTCAAAAATACCAGAAATAGAATCATCCTTAATATCAAGAAGGAAGCAG 149488 Query 110983 GAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAA 111041 |||||| |||||| ||||| | ||||||||||| || || || || || || Sbjct 149487 CTAGACATTTGAGGAAATTTAGTTCCAGAGTTGAAGAGTGTGGGAGTGGCGTGGATAAA 149429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974159450000